| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1345 |
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| Symbol | |
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| ID | 5746900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1498579 |
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| End bp | 1499958 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296424 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_001562374 |
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| Protein GI | 160896792 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CCCTGCCCTC CGCAGCCCCT GGCGCTGCGG CCAGCGGGTC AGCGCATCCG
TTGGTCAGCG GCCCCATCGC CTCCACCCTG GTGCGCCTGG CCGTGCCCAA CATGGTGGCG
CTGAGCATGT CGGTGCTGGT CGCCGTGGCC GAGACCTACT ACGTGGGACA GCTGGGAACC
GTATCGCTGG CGGCCATGGC CCTGGTGTTT CCGCTGGCCA TGCTCACGCA GATGATGAGC
AACGGTGCCA TGGGCAGCGG CGTGTCCTCA GCCATCAGCC GCGCGCTGGG TGCTGGCGAT
GGCGCGCGTG CCTCGGCACT GGCCCTGCAC GCCATCGTGA TCGGCGCCAT CGCAGGCCTG
CTGTACTCGC TCATCTTCGT GCTGTGCGGC GCCACCTTCT ACGGCTGGCT GGGCGGGCGC
GGCGAGGTGC TGGCAGCGGC CACGGGCTTT GGCGCCGTAC TGTTCAGCGG TGCCATCCTG
GTGTGGCTGT GCAATACGCT GGCCTCGGTG GTGCGGGGCA CGGGCAATAT GCGCATGCCG
TCGGCCGTGA TCTTTGCGGC CTCGCTGGTG CAGATCGCCG TCGGCGGCAC GCTGGGGCTG
GGCCTGGGTC CCATGCCGCG CTGGGGCATG CCGGGCGTGG CCGTGGGCAA CATCGTGGCC
ATGGTGCTGT CCGTGGCGGC CTTTCTGGCC TACCTGCAGT GGGGCCAGCA GCGCCTGCAA
CTGGACTGGC GCACGCCGCG CCTGGCCTGG CCCATGTTCC GCGACATCCT GCGCGTGGGC
GCCCTGGCCT GCCTGTCCCC CGTGCAAACG GCGCTGGCCG CGCTGCTGCT GACAGGCATG
GTCGCCCGCC TGGGCCCGCT GGCCCTGGCC GGCTACGGCA TAGGCCAGCG GCTGGAGTTC
CTGCTGATCC CCATGGCCTT CGGCGTGGGC ATGGCCGCCG TGCCCATGGT GGGCATGGCC
ATGGGCGCAG GCCAGGTGGC CCGCGCGCGC CGCGTGGCCT GGTCGGGCGG CGCCATGGCC
GCCGCCCTGC TGGGCGTGCT GGGCCTGGTG GTCATGGTCT GGCCGCAGCT GTGGTCAGGC
ATCTTCACCG GCGACCCGGC CGTGCGCGCC TATGCCGACC TCTACCTGCG CACCGTGGGC
CCGGCCTTCG GGCTGTTCGG CCTGGGACTG GTGCTGTACT TCGCCTCCCT GGGCGCAGGC
CGCGTCTGGG CTCCCGTGCT GGCAGGCACG GTGCGCCTGC TGATCGTGGT GGTGGGCGGC
GGCTGGCTCA TGTCCAGCGG CCTGGGCAGC GCCCAGTCGC TGTTCATCCT CGTGGCCGTG
GCCATGGCCG CCTATGGCGC AGGCACGGCC TGGGCCGTGT GGCGCGCGCG CTGGGGGTGA
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| Protein sequence | MSAALPSAAP GAAASGSAHP LVSGPIASTL VRLAVPNMVA LSMSVLVAVA ETYYVGQLGT
VSLAAMALVF PLAMLTQMMS NGAMGSGVSS AISRALGAGD GARASALALH AIVIGAIAGL
LYSLIFVLCG ATFYGWLGGR GEVLAAATGF GAVLFSGAIL VWLCNTLASV VRGTGNMRMP
SAVIFAASLV QIAVGGTLGL GLGPMPRWGM PGVAVGNIVA MVLSVAAFLA YLQWGQQRLQ
LDWRTPRLAW PMFRDILRVG ALACLSPVQT ALAALLLTGM VARLGPLALA GYGIGQRLEF
LLIPMAFGVG MAAVPMVGMA MGAGQVARAR RVAWSGGAMA AALLGVLGLV VMVWPQLWSG
IFTGDPAVRA YADLYLRTVG PAFGLFGLGL VLYFASLGAG RVWAPVLAGT VRLLIVVVGG
GWLMSSGLGS AQSLFILVAV AMAAYGAGTA WAVWRARWG
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