Gene Daci_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1207 
Symbol 
ID5746762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1343377 
End bp1343847 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID641296287 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001562237 
Protein GI160896655 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA TCCTGCAGCG CGTGAAACAG GCCCGCGTGG AAATCGACGG CCAGGTCGCC 
GGCAGCATAG GCCCCGGCCT GCTGGCCCTG GTCTGCGCAG AGCGCGGCGA CACCGAGGCC
GAAGCCGACA AGCTGCTGGC CAAGATGCTC AAGCTGCGCA TCTTTGCCGA CGACGCGGGC
AAGATGAACC GCAGCGTGCA GGACCTGGAC GGGCAGGGCG CCTGCGGCGG CCTGCTCATC
GTCAGCCAGT TCACGCTGGC GGCCGACACC GGCGGCGGCA ACCGCCCCAG CTTCACGCGC
GCCGCGCCAC CGGCCGAGGG CGAGCGCCTG TACGACTACA TCGTCCAGCG GGCGCGCGCC
CTGCACCCGG AAGTCGCCAC GGGCCGCTTC GGCGCCGACA TGCAGGTGCA CCTGCTCAAC
GACGGGCCCG TGACCATTCC GCTGTCGATA GCTCCGGCCA CCGCGGCATA G
 
Protein sequence
MISILQRVKQ ARVEIDGQVA GSIGPGLLAL VCAERGDTEA EADKLLAKML KLRIFADDAG 
KMNRSVQDLD GQGACGGLLI VSQFTLAADT GGGNRPSFTR AAPPAEGERL YDYIVQRARA
LHPEVATGRF GADMQVHLLN DGPVTIPLSI APATAA