Gene Daci_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1196 
Symbol 
ID5746751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1330290 
End bp1330757 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID641296276 
ProductMarR family transcriptional regulator 
Protein accessionYP_001562226 
Protein GI160896644 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCA ACGCCCTGCC CACCGACACC CCCGAGCTTC TGCGCCTGGA CAACCAGGTC 
TGCTTTGCGC TGTACTCGGC GTCGCTGGCC ATGACCAAGC TGTACAAGCC CCTGCTCGAC
GGCATCGGCC TGACCTATCC GCAGTACCTG GTGATGCTGG TGCTGTGGGA GCGCGACGGC
CTGACCGTGT CGGAGATCGG CGAGCAGCTG ACCCTGGATT CGGGCACGCT GACGCCGCTG
CTCAAGCGGC TCGAGGGCGC GAACCTGCTG GAGCGGGTGC GCGATGCGCA GGACGAGCGC
CGCGTGCGCA TCACGCTCAC CCCGCAAGGC CGGGCACTGC GCGATGCGGC TGAAAAGATT
CCCGCCTGCG TGCTGCAAAG CACGCAGTGC ACGCTGCCCG AGCTGCAGGC GCTGACGCAG
CAACTCGGCG CACTGCGCGA GCGGCTGGCA CCGCGCCGCA GCGACTGA
 
Protein sequence
MPRNALPTDT PELLRLDNQV CFALYSASLA MTKLYKPLLD GIGLTYPQYL VMLVLWERDG 
LTVSEIGEQL TLDSGTLTPL LKRLEGANLL ERVRDAQDER RVRITLTPQG RALRDAAEKI
PACVLQSTQC TLPELQALTQ QLGALRERLA PRRSD