| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1174 |
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| Symbol | |
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| ID | 5746729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1307739 |
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| End bp | 1308443 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296254 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001562204 |
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| Protein GI | 160896622 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGCT CTGTTCAAAA ATGGTCCGCC GAATTCCTCG GAACCCTGTG GCTGACCCTG
GGCGGCTGCG GTGCGGCCGT GCTGGCCGCC GCCTTCCCGC AGGTGGGCAT CGGCCTGGTC
GGCGTCTCGC TGGCCTTCGG CCTGACGGTG CTCACGGGCG CCTATGCCTT CGGGCCCATC
TCGGGCGGGC ACTTCAACCC GGCCGTCTCC GTGGGCCTGG CCATGGGCGG GCGCTTTGCC
TGGAGCGAAC TGCCGGGCTA CATCGTCTCG CAGGTGCTGG GCGCCATCAC GGGCGCGGCC
ATCCTCTATG TGATCGCCAC GGGCAAGGCC GGCGCCGACA TCGGCGGCTT TGCCACCAAC
GGCTACGGCG CGCATTCGCC GGGCGGCTAC GGCATGACGG CAGCCCTGGT CACCGAGGTG
GTGATGACCG CCTTCTTCAT CCTGGTCATC CTGGGCGCCA CGGCCAAGCG CGCGGCGGCC
GGCTTTGGCG GGCTGGCCAT CGGCCTGTGC CTGACGCTGA TCCACCTGAT CTCGATTCCC
GTGACCAATA CCTCGGTCAA CCCCGCGCGC AGCACGGGCC CGGCCCTGTT CGGTCCCGAG
ATCGCCATCT CGCAACTGTG GCTGTTCTGG GTGGCCCCCA TCGTGGGTGC GCTGATCGGC
GCCGTGATCT ACAAGGCCCT GCTGGCCAAC CCGGCCAACG AATAA
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| Protein sequence | MHSSVQKWSA EFLGTLWLTL GGCGAAVLAA AFPQVGIGLV GVSLAFGLTV LTGAYAFGPI
SGGHFNPAVS VGLAMGGRFA WSELPGYIVS QVLGAITGAA ILYVIATGKA GADIGGFATN
GYGAHSPGGY GMTAALVTEV VMTAFFILVI LGATAKRAAA GFGGLAIGLC LTLIHLISIP
VTNTSVNPAR STGPALFGPE IAISQLWLFW VAPIVGALIG AVIYKALLAN PANE
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