| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1171 |
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| Symbol | |
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| ID | 5746726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1302049 |
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| End bp | 1304460 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296251 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001562201 |
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| Protein GI | 160896619 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.963652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCC TTTTCATGCC CCGCCCCGCG CTGGCGCTGG CCATCGCGCT CATGCCCGCC
GCCGTGCTGG CCCAGGCCCA GCGCAGCTAT GACGTCGCTG CCGGCCCGCT GGATGCCGCC
TTGCGCAGCA CGGCCGCCCA GGCCGGCGTG GCCCTGATCT TCACGGCCGA TCAGACGGCC
GGGCAGCGCA GCGCGGGCCT GCGCGGCAGC TATACGGTGG AGGGCGCCTT CGAGGCCCTG
CTGGCCGGCA CCGCCTGGCA GGCCGTGCGC CAGGCCAGCG GCGCCTATGC GCTGCGGCGG
GTGGAGCAGG TGGTGCCCGC TGCCGCTGCA GGCGCCACGC TGGGCACGGT CAACGTGACG
GCGGCTGCCG AGCGCAGCGC GGTCTCCGAA GGCACGGGCT CCTACGCCAC GCGCCAGTCC
AGCACGGCCA CACGGCTGGG CCTGTCGCAG CGCGAGACGC CGCAGTCCGT CAGCGTGGTC
ACGCGCCAGC TCATGGACGA CCAGGGCCTG ACCAGCCTGC CGGAGGTGCT GGAGAAGACG
CCCGGCATTA CCGTGGGCCG CAACGACAGC GAGCGCACTA CCTTCTACTC GCGCGGCTAT
GCCATCGAGA ATTTCCAGTT CGACGGCGTG CCCAACACCA TGGACTCGGC CAACCAGTAC
ACCACCTCGC TGGCCGACAG CGCCATCTAT GACCGCGTGG AGGTGGTCAA GGGCGCCACA
GGCCTGCTCA CGGGCGCGGG CTATCCGTCG GCCGTGGTCA ATCTGGTGCG CAAGCGGCCC
ACCAAGACCT TCCAGGCCTC GGCCGAGGCG GCCATCGGCA GCCATGACCG GTTGCGCGGC
GTGGGCGACA TCTCCGCGCC GCTGACCGAG GACGGCCGCG TGCGCGCCCG CGTGGTGGCG
GTGGCGCAGA ACGCCAAGTC CCATGTGGAC GACTACAGCC GCAACGTGCG CAGCCTGTAC
GGCATCATCG AGGCCGACCT GGGCCCGGGC ACGGTGGCCA GCCTGGGCAT TGACCACATG
CAGACGCGCG CCAACGGGGC CAGCTTCGGC CACATCCCGC TGTTCTTCAA GGATGGCAGC
CGCACGCATT TCCCCACCTC GCTGAACCCG GCCGCGCGCT GGTCGTACTG GGACAACGAC
AGCACCAACC TGTTTGCCGA ACTCAAGCAC AGCTTCGGCA ATGGCTGGAA GGCGGACCTG
TCGGCCAGCC GGCTGCGCCA GTCGCGCGAC GTGGAGGTCG GCGTGGCCGC CCACGGCATG
GTGGACCCGG TCAGCGGCCT GGGCATCAAC ATGCTGTCCA ACAAGATTCC CACCGATGCC
ACCACGCAGG CCGTGAATGC GGCGCTGTCC GGGCCGTTGC AGCTGTTCGG GCGCGAGCAC
GAGCTGTCGT TCGGCGCCAG CTGGTCGCGC CAGCGCCGGC ATGCGCCCGG CTACACCAAC
GCCTACGGCC CCGTGGGCAA CTACTTCGAA TGGGACGGCC AGGTGCCCCG GCCCGATTTC
CAGCTGAGCG ACCACCGCAT GACGCGCATC GTGGAGAAGG GCGCCTTCGG TGCAGCACGC
CTGCGGCCCA CGGACGAGCT GTCCGTGATC CTGGGCGCGC GCGTGAGCTG GTACGACATG
CTGGACGACA CCACGGGCCT GGACGGCAGC TACGGCGTGA ACAACGCGCT GCGCGTGGCG
CACAAGACCG TGCCCTATGC AGGCGTGGTC TATGACCTGA GCCGCCAGCT GTCGCTGTAC
GCCAGCCAGA CCGACATCTT CAATCCGCAG ACCTACTACA AGGACGCAGC CGGCAGCCCG
CTGCCGCCGC TCACCGGCCG CAGCCGCGAA GTGGGCGTGA AGGGCGAGTT CCTGGACGGC
CGGCTCAACG CCTCGCTGGC GCTGTTCCAC ATCCAGCAGC GCAATGCCGC GCAGTACGTC
AGCGCCAATC CGGAAACCGG GGAAGAGGTC TATGCGGCCA TCGACGGCGT GACCAGCAAA
GGCGTGGAGA TGGAGGTGTC GGGCAGCATC ACGCCGGCCT GGAACATCTA CGGCGGCTAC
ACCTACCGTA CTTCGCGCGC ACCGGCCCAG CCCGATGTGA TCCTCAGCGC CGTCAACACC
AACCAGCCGC GCCACCTGTT CAAGCTCAGC ACCAGCTACC GTCTCAACCC GCAGTGGACC
GTGGGCGGCT CGCTGGCCTG GCAGAGCCTG ACCTACTACC AGCAATCCTC CGCCCCCTAT
GCACGCGCCG ACCAGCGCGC CTATGCGCTG GTGGGCCTGA TGGCGCGCTA CGACGTGGAC
CGCCAGTGGT CGGTGACGCT GAACGTCAAC AACCTGTTCG ACAAGACCTA TATGCCGGGC
CTGGGCTCCT ATGGCACGGG CGTGTATGGC GATCCGCGCA ATGTGCTGCT GACTGCGCGG
TACAGGTTCT GA
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| Protein sequence | MQPLFMPRPA LALAIALMPA AVLAQAQRSY DVAAGPLDAA LRSTAAQAGV ALIFTADQTA
GQRSAGLRGS YTVEGAFEAL LAGTAWQAVR QASGAYALRR VEQVVPAAAA GATLGTVNVT
AAAERSAVSE GTGSYATRQS STATRLGLSQ RETPQSVSVV TRQLMDDQGL TSLPEVLEKT
PGITVGRNDS ERTTFYSRGY AIENFQFDGV PNTMDSANQY TTSLADSAIY DRVEVVKGAT
GLLTGAGYPS AVVNLVRKRP TKTFQASAEA AIGSHDRLRG VGDISAPLTE DGRVRARVVA
VAQNAKSHVD DYSRNVRSLY GIIEADLGPG TVASLGIDHM QTRANGASFG HIPLFFKDGS
RTHFPTSLNP AARWSYWDND STNLFAELKH SFGNGWKADL SASRLRQSRD VEVGVAAHGM
VDPVSGLGIN MLSNKIPTDA TTQAVNAALS GPLQLFGREH ELSFGASWSR QRRHAPGYTN
AYGPVGNYFE WDGQVPRPDF QLSDHRMTRI VEKGAFGAAR LRPTDELSVI LGARVSWYDM
LDDTTGLDGS YGVNNALRVA HKTVPYAGVV YDLSRQLSLY ASQTDIFNPQ TYYKDAAGSP
LPPLTGRSRE VGVKGEFLDG RLNASLALFH IQQRNAAQYV SANPETGEEV YAAIDGVTSK
GVEMEVSGSI TPAWNIYGGY TYRTSRAPAQ PDVILSAVNT NQPRHLFKLS TSYRLNPQWT
VGGSLAWQSL TYYQQSSAPY ARADQRAYAL VGLMARYDVD RQWSVTLNVN NLFDKTYMPG
LGSYGTGVYG DPRNVLLTAR YRF
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