Gene Daci_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1154 
Symbol 
ID5746709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1282952 
End bp1283797 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID641296234 
ProductABC transporter related 
Protein accessionYP_001562184 
Protein GI160896602 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG CCATGACCAC CGCACCCACC TCCGCCCCGG CCCCCAGCGA TCCGCTGCTC 
GTGGTCAATG GCATCGAAGT CATCTACAAC CATGTGATCC TGGTGCTCAA GGGCGTTTCG
CTCCAGGTGC CGCGCGAGAG CATCGTGGCC ATTCTGGGCG GCAACGGCGC GGGCAAGACC
ACGACGCTGC GCGCCATCTC CAACCTGCTC AAGGGCGAGC GCGGCGAGGT GACCAAGGGC
ACGATCGAGC TGGAGGGCGA GCGCATCGAA AGCCTCACGC CCTCCGAGCT GGTGCAGCGC
GGCGTGGTCC AGGTCATGGA GGGGCGGCAC TGCTTCGCCC ACCTGACCAT CGAGGAAAAC
CTCATGACCG GCAGCTACAC GCGCACTGAC AAGGGCGAGA TAGCGGCCAA CCTCGAGAAG
GTCTACAACT ACTTTCCGCG CCTGAAGACG CGCCGTACCT CGCAGGCCGC CTACACCTCG
GGCGGCGAGC AGCAGATGTG CGCCATCGGC CGCGCGCTGA TGGCCAATCC GCGCATGGTG
CTCCTGGACG AACCCTCGAT GGGCCTGGCC CCGCAGATCG TCGAGGAGGT GTTCAACATC
GTCCGCGACC TCAACAGCAA GGAAAAGGTC ACCTTCCTGC TGGCCGAGCA GAACACCAAC
ATGGCGCTCA AATACTCGGA CTACGGCTAC ATCATGGAAA GCGGCCGCAT CGTCATGGAC
GGCGCGGCCT CGGACCTGGC CAGCAACGAG GACGTCAAGG AGTTCTACCT GGGCGTGGGC
GGCGGCGAGC GCAAGAGTTT CAAGGACGTC AAGAGCTACA AGCGCAGAAA ACGCTGGCTG
GCCTGA
 
Protein sequence
MDDAMTTAPT SAPAPSDPLL VVNGIEVIYN HVILVLKGVS LQVPRESIVA ILGGNGAGKT 
TTLRAISNLL KGERGEVTKG TIELEGERIE SLTPSELVQR GVVQVMEGRH CFAHLTIEEN
LMTGSYTRTD KGEIAANLEK VYNYFPRLKT RRTSQAAYTS GGEQQMCAIG RALMANPRMV
LLDEPSMGLA PQIVEEVFNI VRDLNSKEKV TFLLAEQNTN MALKYSDYGY IMESGRIVMD
GAASDLASNE DVKEFYLGVG GGERKSFKDV KSYKRRKRWL A