Gene Daci_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1132 
Symbol 
ID5746687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1260949 
End bp1262157 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID641296212 
Productamidohydrolase 
Protein accessionYP_001562162 
Protein GI160896580 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGT TGCAGGAACT GCTGGACCGC GCACCCGAGA TCACCGCGCT GCGCCGCGAC 
ATACATGCCC ATCCCGAACT GTGTTTCGAG GAGATCCGCA CCGCCGACCT CGTGGCCCGG
CAACTGGAGG GATGGGGCAT TGCCGTGCAC CGCGGCCTGG GCCGCACAGG CGTGGTGGGC
ACCATCCACG GCCGTGACGG CGGCGCCAGC GGCCGCGCCG TCGGGCTGCG CGCCGACATG
GACGCCCTGC CCATGCAGGA GTTCAACACC TTCGAGCACG CCAGCCGCCA CGCCGGAAAA
ATGCATGCCT GCGGACATGA CGGCCATGTC GCCATGCTGC TGGCTGCCGC GCAGTACCTG
GCCGCGCACC GCGACAGCTT CGATGGCACG GTGCACCTGA TCTTCCAGCC GGCCGAAGAG
GGCGGCGGCG GCGCGCGCGA GATGGTCGAG GACGGCCTGT TCACCCAGTT CCCCATGCAG
GCCGTGTTCG GCATGCACAA CTGGCCGGGC ATGAAGGCCG GCACCATGGC CGTGGGCCCG
GGCCCGGCCA TGGCGTCCAG CAACGAATTC CGCATCGTCG TGCGCGGCAA GGGCGGCCAC
GCGGCCATGC CGCATATGGT GATCGACCCG CTGCCCGTGG CGGCACAGCT CATCCTGGGC
CTGCAGACCA TCGTCAGCCG CAACGTCAAG CCCATCGAGG CGGGCGTGGT CTCGGTGACC
ATGGTCCACG CGGGCGAGGC CACGAACGTG GTGCCCGACA GCGTGGAGCT GCAGGGCACG
GTGCGCACCT TCACGCTGGA GGTGCTGGAC CTGATCGAGC GGCGCATGAA GACCCTGGCC
GAGAGCATCT GCGCGGCGCA TGACACGCGC TGCGAGTTCG AGTTCGTGCG CAACTACCCG
CCCACCATCA ACTCCGCGCC CGAGGCCGAG TTCGCACGCC GCGTCATGGC CGAGGTCGTG
GGCGAGGCCA ATGTGCTGCC CCAGGAGCCA TCCATGGGCG CCGAGGACTT CGCCTTCATG
CTGCTGGAAA AGCCCGGCGC CTACTGCTTC ATCGCCAATG GCGACGGCGA CCACCGCGCC
ATCGGCCATG GCGGCGGTCC CTGCACGCTG CACAACCCCA GCTACGACTT CAACGACCAG
CTGATCCCGC AGGGCGCCAC GTTCTGGGTG AGGCTGGCCC AGCGCTGGCT GAGCGAGCCC
ACGCGCTGA
 
Protein sequence
MALLQELLDR APEITALRRD IHAHPELCFE EIRTADLVAR QLEGWGIAVH RGLGRTGVVG 
TIHGRDGGAS GRAVGLRADM DALPMQEFNT FEHASRHAGK MHACGHDGHV AMLLAAAQYL
AAHRDSFDGT VHLIFQPAEE GGGGAREMVE DGLFTQFPMQ AVFGMHNWPG MKAGTMAVGP
GPAMASSNEF RIVVRGKGGH AAMPHMVIDP LPVAAQLILG LQTIVSRNVK PIEAGVVSVT
MVHAGEATNV VPDSVELQGT VRTFTLEVLD LIERRMKTLA ESICAAHDTR CEFEFVRNYP
PTINSAPEAE FARRVMAEVV GEANVLPQEP SMGAEDFAFM LLEKPGAYCF IANGDGDHRA
IGHGGGPCTL HNPSYDFNDQ LIPQGATFWV RLAQRWLSEP TR