Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1113 |
Symbol | |
ID | 5746668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1236765 |
End bp | 1237667 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641296193 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001562143 |
Protein GI | 160896561 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACATG GATGCAACGG ATCGGGCGGC GGCCACTGCG GCTGCGCGTC TTCAACCCCT TCTTCTACTT CTTCTGCCCC GATGGGGGAT CTCCCGGCGA TTCCCGAAGT GCCGGCCTTC CAGCCCGTGG GCGAGGCCGG GGCCGAGGTG GCCCGCATCA ACAACACGCC GCTGCACGCA CCCGGACAGC GCCCGCCCGA GCGCGAACTG CGCCAGCGCG CCTGCACCGA GCTGCTGCGC CAGGCGGCCC AGCGCGAAGG CCTGCTGGGC GCCGATGATG CGGCCGGCGA CGACGGCGTC ATCAGCGAGC GCGCCTCCCA GGCCATAGAG CAGCTGCTGG AGCAATCGCT GCACCTGCCC GAGCCCGGCG AGGACGCCTG CCGCCGCCAC TTCGATGCCA ACCCCGCGCG CTTCGCCCAG GGCGAGCGCG TGCGCCTGCG CCACGTGCTG TTTGCCGTCA CGCCCGGCGT GGACGTGCGC GCCCTCACCC AGCGGGCCGA GGCCCTGCTG ATCGAGCTGC GCTGCGCCGA CGACGCCGGC CTGCGCTTTG CCGAGGCCGC GCGCCAATGG TCCAACTGCC CCAGCGGCCA GCATGGCGGC GAACTGGGCT GGCTGGGCCG CAGCGACTGC GCACCCGAAT TCGCGCGCGA TGTCTTTGCC TCCCAGGAAA TCGGCGTGCT GCCGCGCCTG GTGCACAGCC GCTTCGGCCT GCACGTGGTC GAGGTCTGCG CGCGCGAGGC GGGCGTTCTG CCCGACTGGC AGCAGGCGCG CCCGGCCGTC GCCCAGGCCC TGCACCAGCA GACCTGGGTG AGCGCGCTCC ACCAGTACCT GCAACTGCTG GCCGGCCAGT CCGAAGTGGT GGGCGTGCGC ATCGCTGCGG CCGACTCGCC GCTGGTGCAA TAG
|
Protein sequence | MEHGCNGSGG GHCGCASSTP SSTSSAPMGD LPAIPEVPAF QPVGEAGAEV ARINNTPLHA PGQRPPEREL RQRACTELLR QAAQREGLLG ADDAAGDDGV ISERASQAIE QLLEQSLHLP EPGEDACRRH FDANPARFAQ GERVRLRHVL FAVTPGVDVR ALTQRAEALL IELRCADDAG LRFAEAARQW SNCPSGQHGG ELGWLGRSDC APEFARDVFA SQEIGVLPRL VHSRFGLHVV EVCAREAGVL PDWQQARPAV AQALHQQTWV SALHQYLQLL AGQSEVVGVR IAAADSPLVQ
|
| |