| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1099 |
|---|
| Symbol | |
|---|
| ID | 5746654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1216522 |
|---|
| End bp | 1218069 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641296179 |
|---|
| Product | propionyl-CoA carboxylase |
|---|
| Protein accession | YP_001562129 |
|---|
| Protein GI | 160896547 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGC AACCCGAAGT GGACGAGATC GCATACCGCC GCGCACTGGC GGCCAAACTG
GGCGGAGAGG ACAAGGTGGC GCGGCACAAG GCCGCGGGCA AGCTCACGGT GCGCGAGCGC
ATCGATGCCT GCACGGACGC GCAGTCCTTC GTGGAGGTGG GCTCGCTCAC CGGCTCGGGC
CAGTACGACG GCCTGGGCAG GCTGACGGAC TTCACGCCCT CCAACCTCAT CATGGGGCGG
GCGCGCGTGG GCGGGCGGCC CGTGGTCGTG GTGGGTGACG ATTTCACGGT GCGCGGCGGC
GCCAACGACG GCGCCGTGGG CGACAAGCTG ATCTTTGCCG AGAAGATGGC GCACGACCTG
CGCCTGCCCA TGGTGCGCCT GGTGGACGGC ACGGGCGGCG GCGGCTCGGT GCGCAATATC
GAGACCAAGG GCTACACCAG CGTGCCCACC ATGAAGGTCT GGAGCCAGGT GGTGCAGAAC
CTGTCCACCG TGCCCGTGGT CTCGCTGGCC CTGGGCTCGG TGGCCGGCAT GGGCGCAGCG
CGCGTGGCCT CCAGCCATTA CTCGGTGATG GTCAAGGAGA CCGCCCAGCT GTTCAATGCC
GGCCCGCCCG TGGTGGCGCG CATCGGCCAG AACGTGACCA AGAACGAGCT GGGCGGCAGC
CAGGTGCACA CGCGCAACGG CGTGGTCGAT GACGAGGTGG CCACCGAGCA GGAGGCCTTC
GAGCGCGTGC GCCGCTTCCT GTCCTACCTG CCATCGTCGG TGTACGAGCT GCCTGCGCGC
ACCGCGCCGC AGGACGATCC GCGGCGGCGC GACGAATGGC TGCTGTCGGC CATTCCGCGC
GATGGCCGCA AGGTCTACAA GATCCGGCCC ATCGTCGAAT GCCTGGTCGA TGAGGGTTCC
TTCCTGGAGA CGGGCCGCCA CTGGGGCCGG GCCATCGTCA CCGGGCTGGC GCGCATCGAC
GGCTGGCCCG TGGCCGTGGT GGCCAGCGAC CCGTACTTCT ATGGCGGCGG CTGGGACGGC
CCCTCGGCCG AGAAGTTCAC GCGCTTCGTG GACATGGCCC AGACCTTCCA CCTGCCCGTG
GTCAACCTGG TGGACATCGC GGGCTTCCAG ATCGGCGTGG AGGCCGAGAA GGCCGGCGTC
ATGCGCTACG GCGTGCGCGC CCTGGCCGCC GTCTACCAGG CCACCGTGCC CTGGTGCAGC
ATCCTCATCC GCCGCGCCTA CGGCGTGGCG GCGGCCGGCC ACCAGCACAT GGGCCGCTTC
AACTTCCGCT ATGCCTGGCC CTCGGCCAAC TGGGGCTCGC TGCCCATCGA GGGCGGGCTG
GAGGTGGCCT ACAAGGCCGA GATCGAAGGC GCCGACGACC CCGTGCAAAA GCGCGCCGAG
ATCGAGCAGC GCGTGCGCAG CCTGACCTCG CCCTTCCGCA CGGCCGAGGC CTTCGGCATC
GACGAGGTGA TCGATCCGCG CGACACGCGC GCCCTGCTCA GCGAATTCGT GGAACTGGCC
GCGCCGCTGC GCGAGGCCGG AGCGCCGCAG TTCGGCCTGC GGCCCTGA
|
|---|
| Protein sequence | MSWQPEVDEI AYRRALAAKL GGEDKVARHK AAGKLTVRER IDACTDAQSF VEVGSLTGSG
QYDGLGRLTD FTPSNLIMGR ARVGGRPVVV VGDDFTVRGG ANDGAVGDKL IFAEKMAHDL
RLPMVRLVDG TGGGGSVRNI ETKGYTSVPT MKVWSQVVQN LSTVPVVSLA LGSVAGMGAA
RVASSHYSVM VKETAQLFNA GPPVVARIGQ NVTKNELGGS QVHTRNGVVD DEVATEQEAF
ERVRRFLSYL PSSVYELPAR TAPQDDPRRR DEWLLSAIPR DGRKVYKIRP IVECLVDEGS
FLETGRHWGR AIVTGLARID GWPVAVVASD PYFYGGGWDG PSAEKFTRFV DMAQTFHLPV
VNLVDIAGFQ IGVEAEKAGV MRYGVRALAA VYQATVPWCS ILIRRAYGVA AAGHQHMGRF
NFRYAWPSAN WGSLPIEGGL EVAYKAEIEG ADDPVQKRAE IEQRVRSLTS PFRTAEAFGI
DEVIDPRDTR ALLSEFVELA APLREAGAPQ FGLRP
|
|---|
| |