| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1087 |
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| Symbol | |
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| ID | 5746642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1202095 |
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| End bp | 1205280 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296167 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001562117 |
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| Protein GI | 160896535 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAC GCATCATCCG ATTCGCCATA GAGCAGCGCT GGCTGGTCCT GCTGGCCGTG
CTGGCCATGG CGGGCCTTGG CATCTACAAC TACCAGCGCC TGCCCATCGA CGCCGTGCCC
GACATCACCA ATGTCCAGGT GCAGATCAAC ACCCAGGCCA GCGGCTACTC GCCGCTGGAG
ACCGAGCAGC GCGTCACCTA TCCCATAGAG ACGGTGATGG CCGGCCTGCC CCATCTGGAG
CAGACGCGCT CGCTGTCGCG CTACGGCCTG TCCCAGGTCA CCGTGGTGTT CAAGGACGGC
ACGGACATCT ACTTCGCGCG GCAGCTGGTG GGCGAGCGCA TACAGCAGGC GCGCGACAGC
CTGCCTGCCG GCATCACGCC CACGCTGGGC CCCATCTCCA CGGGCCTGGG CGAGATCTAC
CTGTGGACCG TGGAGGCCGA GGACGATGCG AAAAAGCCCG ACGGCACGCC CTACACCCCC
ATGGACCTGC GCGAGATCCA GGACTGGGTC ATCAAGCCGC AGCTGCGCAA CGTGCCCGGC
GTCACCGAGA TCAACTCCAT CGGCGGCTAC GCCAAGGAGT ACCTGGTGGC GCCAGCGCCC
GAGAAGCTGG CGGCCTACGG CTTCACGCTG GCCGACATCG TCACCGCCCT GCAGCGCAAC
AACAGCAACG TGGGTGCGGG CTATATCGAG CGCCAGGGCG AGCAGTACCT GATCCGCGCG
CCGGGCCAGG TCGGCGGCAT CGCCGACATC CGCGAGGTCA TCGTGGGCTC GGCCCAGGGC
CAGCCCATCC GCATCCGCGA CCTGGCCGAG GTAGGGCTGG GCCAGGAGCT GCGCACGGGC
GCGGCCACCG ACAACGGCCG CGAGGTGGTG CTGGGCACGG TGTTCATGCT GATCGGCGAG
AACAGCCGCA CCGTCTCGCG CGCCGTGGAC CAGCGCATGG CCGAGATCAA CCGGGGCCTG
CCCCCGGGCG TCAAGGCCAT CACCGTCTAC GACCGCACCA ACCTGGTGGA CAAGGCCATC
GCCACGGTCA AGAAGAACCT GGTGGAGGGC GCGGCCCTGG TGGTGGTCAT CCTCTTCCTG
TTCCTGGGCA ACCTGCGCGC GGCGCTGATC ACGGCGCTGA TCATCCCGCT GTCCATGCTG
TTCACCTTCA CGGGCATGGT GCACTACAAG GTCAGCGCCA ACCTCATGAG CCTGGGGGCG
CTGGACTTCG GCATCATCAT CGACGGGGCC GTGGTCATCG TGGAGAACTG CGTGCGCCGC
CTGGCCCATG CGCAGGAGGC GCGCGGAAGG TCGCTGACGC GCAGCGAACG CTTCCATGAA
GTCTTCGCCG CCGCGAAGGA AGCGCGCCGC CCGCTGCTGT TCGGCCAGCT CATCATCATG
GTGGTCTACC TGCCCATCTT CGCGCTCACG GGCGTGGAGG GCAAGATGTT CCATCCCATG
GCGCTGACGG TGGTCATCGC GCTGGCCGGC GCCATGCTGC TGTCCATCAC CTTCATCCCG
GCGGCGATTG CGCTGTTCAT GGGCGACAAG GTGGCCGAGA AGGAAAACCG CCTCATGGGC
TGGGCGCGCC GCGGCTATGC GCCCGTGCTG GCGCGCGTCA TGGCCGCGCC CGCCGTGGTG
CTCACGGCCG CCGCCGTGGC CGTGGCGCTG AGCCTGCTGC TGGCCACGCG CCTGGGCAGC
GAGTTCGCGC CCAACCTCAA CGAGGGGGAC TTCGCCATCC AGGCGCTGCG CATCCCCGGC
ACCAGCCTTA CGCAGTCGCT GGAAATGCAG ATGCAGATCG AGAAGGCGCT CAAGAAGGAG
TTCCCCGAGA TCGACCGCGT GTTCGCGCGC ACCGGCACGG CCGAGATCGC CTCCGACCCC
ATGCCGCCCA ACATCTCCGA CGGCTACATC ATGCTGAAAG CCCGCAGCGA GTGGCCCGAC
CCGGCGCGCC CGCGCGATGA GCTGCTGGCC GCCGTGCAGG CGTCGGTGGA CCGCATCCCT
GGCAACAACT ACGAGTTCTC CCAGCCCATC CAGCTGCGCT TCAACGAGCT GATCTCGGGC
GTGCGCAGCG ACGTGGCCGT GAAGATCTTC GGCGACGACA TGGCCGTGCT GGAGAAAAGC
GCCCAGACCG TGGCCGGCAT GCTGCAGCAG ATTTCGGGCG CCTCCGAGGT CAAGGTCGAG
CAGACCACGG GCCTGCCCAT GCTCACCGTG CAGATCGACC GCGAAAAGGC CTCGCGCTAC
GGCCTGAACA TGGGCGATGT GCAGGACGCC ATCAGCACCG CCATGGGCGG CACCGAGGCG
GGCACGGTAT TCCAGGGCGA CCGGCGCTTC GACATCCAGG TGCGCCTGCC GGACGCCGTG
CGCAACGACC TGCAGGCCCT GAGCCGCCTG CCCATCGCCC TGCCGCGCGG GGCGGACGGG
CGCATCGGCT TCGTGCCGCT GTCGGCCGTG GCCACGTTCG AGACCGCGCC CGGCCCCAAC
CAGGTCAGCC GCGAAGACGG CAAGCGCCGC ATCGTGGTCA GCGCCAATGT GCGCGGGCGC
GACATGGGCT CCTTCGTGGG CGAGGCACAG CAAAAGCTGC AAGGCCTGTC GCTGCCGCCC
GGCTACTGGA CGCGCTGGGG CGGCACCTTC GAGAACCTGG AGTCGGCCAC GCGCCGCCTG
CAGATCGTCG TGCCCGTGGC GCTGCTCATG GTCTTCGTGC TGCTGTTCGC CATGTTCGGC
AATGTGCGCG ACGGGCTGGT GGTCTTCACG GGCATTCCGT TCGCGCTCAC GGGCGGCATC
CTGGCGCTGT GGCTGCGCGA CATACCGCTG TCCATCTCGG CGGCGGTGGG CTTCATCGCG
CTGTCGGGCG TGGCCGTGCT CAACGGCCTG GTCATGATCT CCTGGATCAG AACCTTGCGC
GAACAGGGCG CCAGCGTGCC CGACGCCGTG ACCGAGGGCG CGCTCACCCG GCTGCGCCCC
GTGCTGATGA CGGCCCTGGT CGCCTCGCTG GGCTTCGTGC CCATGGCGAT TGCCACGGGC
ACGGGCGCCG AGGTGCAGCG GCCGCTGGCC ACGGTGGTGA TCGGCGGCAT CCTGTCGTCC
ACGCTGCTGA CCTTGCTGGT GCTGCCGCTG CTGTACCGGC TGGTGCATCG CAACGATCCG
TCGGAGGGAA TGCAAGGGCA GGAGGGACAG CCCGACAGCG AGGGCAAGGG CGCCGTGGCC
GCCTGA
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| Protein sequence | MFERIIRFAI EQRWLVLLAV LAMAGLGIYN YQRLPIDAVP DITNVQVQIN TQASGYSPLE
TEQRVTYPIE TVMAGLPHLE QTRSLSRYGL SQVTVVFKDG TDIYFARQLV GERIQQARDS
LPAGITPTLG PISTGLGEIY LWTVEAEDDA KKPDGTPYTP MDLREIQDWV IKPQLRNVPG
VTEINSIGGY AKEYLVAPAP EKLAAYGFTL ADIVTALQRN NSNVGAGYIE RQGEQYLIRA
PGQVGGIADI REVIVGSAQG QPIRIRDLAE VGLGQELRTG AATDNGREVV LGTVFMLIGE
NSRTVSRAVD QRMAEINRGL PPGVKAITVY DRTNLVDKAI ATVKKNLVEG AALVVVILFL
FLGNLRAALI TALIIPLSML FTFTGMVHYK VSANLMSLGA LDFGIIIDGA VVIVENCVRR
LAHAQEARGR SLTRSERFHE VFAAAKEARR PLLFGQLIIM VVYLPIFALT GVEGKMFHPM
ALTVVIALAG AMLLSITFIP AAIALFMGDK VAEKENRLMG WARRGYAPVL ARVMAAPAVV
LTAAAVAVAL SLLLATRLGS EFAPNLNEGD FAIQALRIPG TSLTQSLEMQ MQIEKALKKE
FPEIDRVFAR TGTAEIASDP MPPNISDGYI MLKARSEWPD PARPRDELLA AVQASVDRIP
GNNYEFSQPI QLRFNELISG VRSDVAVKIF GDDMAVLEKS AQTVAGMLQQ ISGASEVKVE
QTTGLPMLTV QIDREKASRY GLNMGDVQDA ISTAMGGTEA GTVFQGDRRF DIQVRLPDAV
RNDLQALSRL PIALPRGADG RIGFVPLSAV ATFETAPGPN QVSREDGKRR IVVSANVRGR
DMGSFVGEAQ QKLQGLSLPP GYWTRWGGTF ENLESATRRL QIVVPVALLM VFVLLFAMFG
NVRDGLVVFT GIPFALTGGI LALWLRDIPL SISAAVGFIA LSGVAVLNGL VMISWIRTLR
EQGASVPDAV TEGALTRLRP VLMTALVASL GFVPMAIATG TGAEVQRPLA TVVIGGILSS
TLLTLLVLPL LYRLVHRNDP SEGMQGQEGQ PDSEGKGAVA A
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