| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1066 |
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| Symbol | |
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| ID | 5746621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1176348 |
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| End bp | 1177484 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641296146 |
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| Product | twitching motility protein |
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| Protein accession | YP_001562096 |
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| Protein GI | 160896514 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.360926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAG ATCAGGCCAC CAAGTTCATC AACGACCTGC TCAAGCTCAT GGTCAGCCGC
AACGGCAGCG ACTTGTTCAT CACGGCGGAA TTCCCGCCGG CGATCAAGAT CGACGGGCGC
ATCACCAAGG TGTCGCCGCA GCCGCTGTCG CCCGTGCACA CGCTGACGCT GGCGCGCTCG
GTCATGAGCG ACAAGCAGAT CGCCGATTTC GAGCGCACCA AGGAGTGCAA CTTCGCCATC
TCGCCGCCGG GCATAGGGCG CTTTCGCGTC AACGCCTTCA TCCAGCAGGG CCGCGTAGGC
ATGGTGATGC GGACGATTCC GCTGGCCCTG CCCACCATCG ACAGCCTGGG CGTGCCCCAG
GTGCTCAAGG AGGTGGCCAT GACCAAGCGC GGCCTGTGCA TCCTGGTCGG CGCCACGGGC
TCGGGCAAAT CCACCACGCT GGCCGCCATG GTGGACTGGC GCAACGAGAG CTCCTACGGC
CACATCGTGA CCATCGAGGA CCCCATCGAA TTCGTGCACC CGCACAAGAA CTGCGTGGTC
ACGCAGCGCG AAGTGGGCCT GGACACGGAC AGCTGGGACG CGGCGCTCAA GAACTCCCTG
CGCCAGGCGC CGGACGTGAT CCTGATGGGC GAAATCCGCG ACCGCGAGAC CATGGAGCAC
GCCATCGCCT TCTCGGAAAC CGGCCACCTG TGCCTGGCCA CGCTGCACGC CAACAGCGCC
AACCAGGCGC TGGACCGCAT CGTCAACTTC TTCCCCGAGG ACCGCCGCCC GCAGCTGTTG
ATGGACCTGT CGCTGAACCT GCGCGCCATG GTCTCCCAGC GCCTGCTGCC CAAGCAGGAC
AGCAAGGGCC GCGTGGCCGC CATCGAGGTG ATGCTCAACT CGCCGCTGAT CTCCGACCTG
ATCTTCAAGG GCGAGGTCAC CGAGATCAAG GAGATCATGA AGAAAAGCCG CAACCTGGGC
ATGCAGACCT TCGACCAGGC GCTGTTCGAC CTGTTCGAGT CCAACCTGGT CACCTACGAG
GATGCACTGC GCAATGCCGA CTCGGTCAAC GACCTGCGGC TGCAGATCAA GCTGGGCAGC
CAGCGCGCCA AGTCGCTGGA CCTGGCGGCG GGCACCGAGC ATTTCGCCAT CGTCTGA
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| Protein sequence | MERDQATKFI NDLLKLMVSR NGSDLFITAE FPPAIKIDGR ITKVSPQPLS PVHTLTLARS
VMSDKQIADF ERTKECNFAI SPPGIGRFRV NAFIQQGRVG MVMRTIPLAL PTIDSLGVPQ
VLKEVAMTKR GLCILVGATG SGKSTTLAAM VDWRNESSYG HIVTIEDPIE FVHPHKNCVV
TQREVGLDTD SWDAALKNSL RQAPDVILMG EIRDRETMEH AIAFSETGHL CLATLHANSA
NQALDRIVNF FPEDRRPQLL MDLSLNLRAM VSQRLLPKQD SKGRVAAIEV MLNSPLISDL
IFKGEVTEIK EIMKKSRNLG MQTFDQALFD LFESNLVTYE DALRNADSVN DLRLQIKLGS
QRAKSLDLAA GTEHFAIV
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