| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0977 |
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| Symbol | |
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| ID | 5746531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1087249 |
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| End bp | 1088661 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641296057 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001562008 |
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| Protein GI | 160896426 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAGCG CCCAGGCAGA TGCGCCCACC TCGCCGGCCT CGCTGTCCAC CAAGACTGCA
CGCGAAAGCC GGCTGCCCCC GGCCGTGGAG GCGGCGCTTG CGCGCGCCAA GCTGCCGCGC
GACGCGGTCT CGGCCCTGGT GGTCGAGGTC GATGGCCGAG CCGCCCCGCG CCTGGACTGG
CAAAGCCACG TGGCCATGAA CCCCGCCTCG GTCATGAAGC TGGTCACCAC CTATGCGGCG
CTGGACCAGC TGGGTCCCGC ACATGTCTGG CGCACGCCCG TCTTCCTGGG CGGGCCGGTG
CAGGACGGCG TGCTGCGCGG GCCGCTGTAC ATCCAGGGCC AGGGCGATCC CAAACTCGTG
ATGGAGCGAC TGTGGCTGAT GCTGCGCCGC CTGCAGGGCA TGGGCATCAA GGTCATCGTG
GGCGACATCG TGCTGGACCG CAGCGCGTTT TCCGTGAGCG GCCATGACGC GGCCACCTTC
GACAACGAAC CCTGGCGCCC CTACAACGTG GCGCCCGACG CGCTGCTGGT CAACTACAAG
GCCGTGACCG TGGGCTTCAC GCCCGACGCG GCGGCGGGCG TGGCGCGGCT GCAATACGAT
CCGCCGCTGG CCGGCATCCA GCAGCAGGAA ACCGTGCCGC TGGCGCCGGC CGGCAGCGAA
TGCGGCGACT GGCGCGCCCG TCTGCAGCTG GACATGACCG ACCCGCTGCG CATCGCCTTT
GCCGGCCCGT TCCCGGCCAG CTGCGGCGAC AAGAGCTGGT CGCTGGCGCC GGCCCAGCCC
GAGGCCTTCG CGGCCCGCGC CATCGAGGGC ATGTGGCGCG AGCTGGGCGG CAAGCTCACC
GGCACCGTGC ACGACGGCCG CGTGCCGGCC GGGCTGCAGC CAGCGTTCCA GAGCGAATCG
CCCTCGCTGG CCGAGGTGGT GCGCGACATC AACAAGTACA GCAACAACGT CATGGCCCAG
CAGGTGTTCC TGACCATGGG CATGCAGCGC ACGGGCGTGG CCAGCTTCGA GTCCTCGCGC
CAGGCCCTGG GCCAGTGGTG GCAGGCGCGC TGGGGCGCGG CCGAGCAGCC CGTGGCCGAC
AACGGCGCCG GCCTGAGCCG CGAGGCGCGC ATCACCGCCT CGGGTCTGGG CCGCTTGCTG
CAGCAGGCCT GGGCCTCGCC GGTGATGCCG GAGTTCGTGG CCTCCATGCC CATCGTCGGC
GTGGATGGCA CGCTGCGCCG CAGCCTCAGC CGGGCCCAGG GCATGGCGCA TCTGAAGACC
GGCACGCTGC GCGATGCTTC GGCCCTGGCC GGCTATGTGG ACGGGGCCAG CGGCCGCCGC
TACGTGCTGG TGGCCATGGC CAACCACGCC AACGCCCCGG CCGCGCGCGC GGCCTGGGAT
GCGCTGGTGG ACTGGACGGC GCGCGACCGC TGA
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| Protein sequence | MASAQADAPT SPASLSTKTA RESRLPPAVE AALARAKLPR DAVSALVVEV DGRAAPRLDW
QSHVAMNPAS VMKLVTTYAA LDQLGPAHVW RTPVFLGGPV QDGVLRGPLY IQGQGDPKLV
MERLWLMLRR LQGMGIKVIV GDIVLDRSAF SVSGHDAATF DNEPWRPYNV APDALLVNYK
AVTVGFTPDA AAGVARLQYD PPLAGIQQQE TVPLAPAGSE CGDWRARLQL DMTDPLRIAF
AGPFPASCGD KSWSLAPAQP EAFAARAIEG MWRELGGKLT GTVHDGRVPA GLQPAFQSES
PSLAEVVRDI NKYSNNVMAQ QVFLTMGMQR TGVASFESSR QALGQWWQAR WGAAEQPVAD
NGAGLSREAR ITASGLGRLL QQAWASPVMP EFVASMPIVG VDGTLRRSLS RAQGMAHLKT
GTLRDASALA GYVDGASGRR YVLVAMANHA NAPAARAAWD ALVDWTARDR
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