Gene Daci_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0967 
Symbol 
ID5746521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1078026 
End bp1079321 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content68% 
IMG OID641296047 
Productmajor facilitator transporter 
Protein accessionYP_001561998 
Protein GI160896416 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATA TGCGTGCGGC CCGCTGGTGG GGGGTGATCA GCCTCTTCAT CATCGTCGCC 
ATCTCCTATG TGGACCGGAT CAACCTTTCG ATCCTCATCC TCGATCAGGG ATTTCTGGAC
CACATCGGGC TGACGCACGA CGACCGCACG CGCCAGGGCC TTCTGGCCAC GGCCTTCATG
GTGGGCTACG GCGTTTCTTC CTTCGTGTTG ACGCCGTTTT GCGCGGCGCT CTTCGGCGTG
CGCCGAAGCC TGGTGGTCGG CCTGCTGCTG TGGGGCGCCG TGTCCTTTCT GTCCCCGGCC
ATGAACAGCT ATGGCCTGCT GCTGGCCTCG CGCATCCTGC TGGGCATCTC CGAAGGGCCG
CTGTACTCGC TGGCGGGCAG CTACATCAAG GCGCATTTCC AGAGCCACGA GAACGGCCTG
CCCAACTCCT TCGTGAACAT GGGCACGGGC CTGGGGCTGG CGGTGGGCTA CCCGCTGATC
GGCTACCTGG TGGCCGGCCA TGACTGGCAG ACCTCGTTCC ACGTGCTGGG CCTGATCAAT
GTGGCCATCG GCATTCCGCT GGTGCTGGCC TTCATCCGCA TGCCCCGCGT GGACACCGGC
ATGCCGCGCC CGCGTTCGCT GGGCGAGGCG GTGGGACAGG TCGGGCAGAT CGTGCGCGGC
GCCATGCACA CGCGCTATCT GGTGCTGGTG GCCGTGCTGT CGGCGGCCTT CTTCTCCTAC
CTCTGGGGCA GCAGCAACTG GCTGCCGGCC TATCTGGAGT CGCGCGGCTT TTCGCTGCGC
GAGATGGGCT GGCTAGCCTC GCTGCCGCAG TACGCCACGG TATTGGCCGT GCTGGTCGGC
GGCATCGTCA TCGACCGCCT GCCGCGCCGC CAGGTGCCGC TGATCTTCGT CGGCGGCAGC
CTGGGCCTGG CGCTGGCCAT CTGGCTGGCC ATCCACATGG ACGACCGCTA CGCGGCGGCC
TACTGCCTGA TCGCCGCCAA CTTCTGCTGG GGCCTGATGA GCCCGGCCAT TCCCAGCACC
GTGCAGTACT GCGCGCGGCC CGAGCATGTG GCCAGCGCCT ACGGCGTCGT CAACGGCACG
GCGACCCTGG TGGCTGGCTT CATGCCTGCG CTCATGGGGG CCGTCATCGG CTGGACCTCG
CATTCGGCCG GTGGCGGGTT CGTCGCAGGC TTCAGCCTGC TGGTGGGCAC GCAGCTGGTG
GTCATGGTCT GCGGCCTGGT GCTGTGGCTG CGCGAGCGCG GCCGGGGCAC CGACAGTGCC
AGCGATGCCC GGGACAGGTC CGCGCGCACG GCCTGA
 
Protein sequence
MKDMRAARWW GVISLFIIVA ISYVDRINLS ILILDQGFLD HIGLTHDDRT RQGLLATAFM 
VGYGVSSFVL TPFCAALFGV RRSLVVGLLL WGAVSFLSPA MNSYGLLLAS RILLGISEGP
LYSLAGSYIK AHFQSHENGL PNSFVNMGTG LGLAVGYPLI GYLVAGHDWQ TSFHVLGLIN
VAIGIPLVLA FIRMPRVDTG MPRPRSLGEA VGQVGQIVRG AMHTRYLVLV AVLSAAFFSY
LWGSSNWLPA YLESRGFSLR EMGWLASLPQ YATVLAVLVG GIVIDRLPRR QVPLIFVGGS
LGLALAIWLA IHMDDRYAAA YCLIAANFCW GLMSPAIPST VQYCARPEHV ASAYGVVNGT
ATLVAGFMPA LMGAVIGWTS HSAGGGFVAG FSLLVGTQLV VMVCGLVLWL RERGRGTDSA
SDARDRSART A