Gene Daci_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0882 
Symbol 
ID5746436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp989076 
End bp989906 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content71% 
IMG OID641295962 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_001561913 
Protein GI160896331 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.614952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAT CGTCCCCCAT TCACTGGCCT GCGGAATCGC TGTGGCAGGC CATCGAGCCG 
CAACTGCCGG GCTTTTCCGT GGAAATCGTG CCCAGCATCG GCTCGACCAA TACCGAGCTG
ATGGCGCGTG CCCGCGATGG CCGCAACGAA CCCGTGCTGC TGGTGACCGA AGTGCAGACC
GCCGGCCGGG GCCGGCTGGG CCGCCAGTGG ACCAGCGGCG TGGGCGATTC GCTGACCTTC
TCGCTGGGCA TGCCACTGGC GCCTGCCGAC TGGTCCGGCC TGTCGCTGGC CGTGGGGCTG
AGCGTGGCGC AAAGCCTGCA GCCGCAATTG CCCGCCCCGG GCTCGCAGCG CCCGCGCATC
GGCCTCAAAT GGCCCAACGA CCTGTGGATC GACGGCGACC GCAAGCTCGG CGGCATCCTG
ATCGAGACGG CCAGCTTTGT CGGCAGCGCC GCACATGAGC CCGGCACGCC GCGCTACGTG
GTCGTGGGCA TCGGCCTGAA TGTGCGCCCC CGCCCCGGCG ACGGCATGCG CACGCCCCCG
GCCAGCCTGC TGGAGCTGGA CGAACGCCTG GACGCACCCA CCGCCCTGGC CTGCGTGCTG
CCGGGCCTGG TCTCCGACAT CCAGACCTTT GCAGCCCAGG GCTTTGCGCC GCTGGTGGAG
CGCTTTGCCC AGCGCGACCT GCTGCGTGGC CGCGCCGTCA ATCTCAGCGA TGGCGAAAGC
GGCACGGCCG AGGGCGTGGG CCCCGATGGC GCGCTGCTGG TGCGCACGGC GCGCGGCCTG
CAGGCCATCA CCAGCTCGGA AATCAGCGTG CGCCCGGCTG CTGTAGGCTA G
 
Protein sequence
MMASSPIHWP AESLWQAIEP QLPGFSVEIV PSIGSTNTEL MARARDGRNE PVLLVTEVQT 
AGRGRLGRQW TSGVGDSLTF SLGMPLAPAD WSGLSLAVGL SVAQSLQPQL PAPGSQRPRI
GLKWPNDLWI DGDRKLGGIL IETASFVGSA AHEPGTPRYV VVGIGLNVRP RPGDGMRTPP
ASLLELDERL DAPTALACVL PGLVSDIQTF AAQGFAPLVE RFAQRDLLRG RAVNLSDGES
GTAEGVGPDG ALLVRTARGL QAITSSEISV RPAAVG