Gene Daci_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0880 
Symbol 
ID5746434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp987278 
End bp988210 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content67% 
IMG OID641295960 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001561911 
Protein GI160896329 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.371907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCG TCCTGCGACT GATCAGTCAG AACTTCCTGC AATCCCTGCC CGGCGCGGCA 
GGCTCCGGCG CGGCCGATGC CGCGCCGCCC ATGGTCACCA GCGTTGCCGG CGCCAGTGCC
GTGGTGCTGG ACTCGCCGCA CAGCGGCACG GTCTACCCGG CGGACTTCGG CTCCTGCCTG
CCGCTGGCCA CGCTGCGCCA GGCCGAGGAC ACGCATGTGG AGAAGATCTA CGCCTTTGCG
CCGGGCCTGG GCGTGAGCTG GGTGGAGGCG CATTTCCCGC GCATCTACCT GGATGCCAAC
CGCGACACCA CCGAGATCGA CACCACCATG ATCGAGGGCG AGTGGCCGCT GCCCGTCACC
ACCGACCAGG TCGTGCTGCA GAAGGTGCGC CTGGGCAAGG GCCTGATCTG GAAGTTCACC
GATGAGGGCG TGCCCATCTA TGACCGCCAA CTGCCCGCCG CTGAACTGCT GCAGCGCATC
GAGCGCTGCT GGAAGCCCTA CCACACCGCC GTGGAGCGTG CCATCGACGG CGCCCATGCG
CGCCATGGCT ACAGCATCCA TATCAACTGC CACTCCATGC CTTCCGTCGC AGCCAGCCAC
GCCACGCTGC ACCCGGGCCT GGTCCATGCC GACTTCGTCA TCGGCGACCG CGACGGCAGC
ACGGCCAGCC CGGCGCTGTC CGAGCGCATC TGCGCCTTCC TGCGCAAGCG CGGCTACAGC
GTGGACTACA ACCATCCCTA CAAGGGCGTG GAGCTGGTGC GCCGCTACGG CAAGCCCGCC
GAGCACCGCC ACAGCATCCA GATCGAGATC AACCGCAAGC TCTACATGAA CGAGCAGACC
CTGGATCTCG ACCAGGCCGG CTACCTGCGC CTGACCACCG ACCTGAAGGT GCTGGTGGAG
CAGCTGATGG CCACCGATCC GCGTACGCTC TGA
 
Protein sequence
MHPVLRLISQ NFLQSLPGAA GSGAADAAPP MVTSVAGASA VVLDSPHSGT VYPADFGSCL 
PLATLRQAED THVEKIYAFA PGLGVSWVEA HFPRIYLDAN RDTTEIDTTM IEGEWPLPVT
TDQVVLQKVR LGKGLIWKFT DEGVPIYDRQ LPAAELLQRI ERCWKPYHTA VERAIDGAHA
RHGYSIHINC HSMPSVAASH ATLHPGLVHA DFVIGDRDGS TASPALSERI CAFLRKRGYS
VDYNHPYKGV ELVRRYGKPA EHRHSIQIEI NRKLYMNEQT LDLDQAGYLR LTTDLKVLVE
QLMATDPRTL