| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0807 |
|---|
| Symbol | |
|---|
| ID | 5746361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 900576 |
|---|
| End bp | 901211 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641295887 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001561838 |
|---|
| Protein GI | 160896256 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.271007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCG TACGTGACCC TGCTGGCTAC GATGGCCAGC GTGAAATGAT CCTCTCCCAC
GCCGCCCAGC TGTTCGCGCA GCGCGGCTAT GCGGGCACCT CCATGAACGA GGTGGCTGCG
GCCTGCGGCG TCTCCAAGGC CACGCTCTAC CACTATGTGC TCGACAAGCA CGACCTGGCC
GTGCGCATTG CCGAAGAGCA TGTGCTGCGC CTCGAAGCCC TGGTCAACGA CACCCTGCAG
GCCCATGCCG ATCCCGAGCA GCGCCTGCAT GCGCTGATCC GCGGCTTCGG CCAGGAGTAC
GCCCAGGCCC AGAATGCCCA CCGCGTGCTG ACCGAGGACG TGCGCTTCCT GCGCGAGGAA
GACCAGCAGC GCATCCTGGA CGTGGAGCGC CGCGTGGTCG CCGCCTTTGC GCAGACCATT
GCCCAGGTGC GCGGCGAGCC CGCCGACAGC GCCCTGGGCA AGCCCCTGGC CATGCTGCTG
TTCGGCATGA TCAACTGGAC CTTCACCTGG CTCAAGCCGG GCGGCACGCT GGACCATGAC
GCCATTGGCA CCATGGTGTC CCAGCTGTTC TTCGGCGGCG TGCGCGCGGT CAGCGTGCCG
GACGGCAAGA AGCCGCGCAA GGCCCGCCAG GCCTAG
|
|---|
| Protein sequence | MARVRDPAGY DGQREMILSH AAQLFAQRGY AGTSMNEVAA ACGVSKATLY HYVLDKHDLA
VRIAEEHVLR LEALVNDTLQ AHADPEQRLH ALIRGFGQEY AQAQNAHRVL TEDVRFLREE
DQQRILDVER RVVAAFAQTI AQVRGEPADS ALGKPLAMLL FGMINWTFTW LKPGGTLDHD
AIGTMVSQLF FGGVRAVSVP DGKKPRKARQ A
|
|---|
| |