Gene Daci_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0758 
Symbol 
ID5746312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp841275 
End bp842405 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content67% 
IMG OID641295838 
ProductABC-2 type transporter 
Protein accessionYP_001561789 
Protein GI160896207 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC GCCTTTTCTC CAACATCTAC CGGCTGGGCG TCAAGGAGCT GTGGAGCCTG 
TGGCGCGACC CCGTGCTGCT GGTGCTCATC GCCTATGTGT TCACGGTCTC CATCTACACG
GCGGCCACGG CCATGCCCGA GAGCCTGCAC AACGCGCCCA TCGCCATCGT GGACGAGGAC
GGCTCGCCGC TGTCGCAGCG CATCGCGGGC GCCTTCTATC CGCCGCAGTT CGCGCCGCCG
GCCATGATTG ACCGCACGCA GATGGACCCG GGCATGGACT CGGGCACCTA CACCTTCGTG
CTCAACATCC CGCCCAACTT CCAGCGCGAC GTGCTGGCGG GCCGCGCCCC CGAGCTGCAG
CTGAACGTGG ATGCCACGCG CATGAGCCAG GCCTTCACGG GCAACAGCTA TGTGCAGCAG
ATCGTCACGG CCGAGGTCAG CGAGTTCGTG CGGCGCTTTC GGGGCGCCAC CGCCCTGCCC
GTGGACCTGG TGGTGCGCGC GCGCTTCAAT CCGGCGCTGG ACAAGGTCTG GTTCGGCGGG
CTGATGCAGA TCATCAACAA CGTGACCATG CTGTCCATCA TCCTCACGGG CGCGGCCCTG
ATCCGCGAGC GCGAGCACGG CACGGTGGAG CACCTGCTGG TCATGCCGGT GACACCGACC
GAGATCATGC TGGCCAAGAT ATGGTCCATG GGACTGGTCG TGCTGGTCAC CGCCTTTGCC
TCGCTCAACC TCGTGGTGCG CGGCGCCCTG GGCGTTCCCA TCGAAGGCTC GCTGCCGCTG
TTCCTGGCGG GGGCCGCGCT GTGCCTGTTC GCCACAACGT CGCTGGGGAT CTTCCTTGCC
ACGCTGGCGC GCAACATGCC ACAGTTCGGC ATGCTGCTGG TGCTCGTGCT GCTGCCGCTG
CAGCTGCTGT CGGGCGCCAT GACGCCGCGC GAGAGCATGC CCGAGCTGGT GCAGAACATC
ATGCTGGCCG CGCCGACCAC CCACTTTGTC GAGCTGTCGC AGGCCATCCT CTACCGCGGA
GCGGGGCTGG ACGTGGTCTG GAAGCCCTTC CTCGCGCTGG CCGCGATCGG CTCCGTGCTG
TTCGCCCTCA CGCTCACCCG TTTTCGCAAG ACCATCAGCC AGATGGCCTG A
 
Protein sequence
MRTRLFSNIY RLGVKELWSL WRDPVLLVLI AYVFTVSIYT AATAMPESLH NAPIAIVDED 
GSPLSQRIAG AFYPPQFAPP AMIDRTQMDP GMDSGTYTFV LNIPPNFQRD VLAGRAPELQ
LNVDATRMSQ AFTGNSYVQQ IVTAEVSEFV RRFRGATALP VDLVVRARFN PALDKVWFGG
LMQIINNVTM LSIILTGAAL IREREHGTVE HLLVMPVTPT EIMLAKIWSM GLVVLVTAFA
SLNLVVRGAL GVPIEGSLPL FLAGAALCLF ATTSLGIFLA TLARNMPQFG MLLVLVLLPL
QLLSGAMTPR ESMPELVQNI MLAAPTTHFV ELSQAILYRG AGLDVVWKPF LALAAIGSVL
FALTLTRFRK TISQMA