Gene Daci_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0659 
Symbol 
ID5746202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp720139 
End bp721272 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID641295728 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_001561690 
Protein GI160896108 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.792305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0269811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGGA AAATCAGGGT GATCGTGGTG GACGACTCTG CGCTGGTGCG CAGTCTGCTG 
TCCGAGATCA TCAATCGCCA GCACGACATG GAATGCATCG GCTCGGCCAA TGACCCGCTG
ATCGCACGCG AAATGATTCG CGAGATGAAC CCCGACGTGA TCACGCTCGA TGTGGAAATG
CCGCGCATGG ACGGCATCGA CTTCCTGGGC CGGCTCATGC GCCTGCGCCC CATGCCGGTG
GTCATGATCT CCACGCTGAC CGAACGCGGC GCCGAGGTCA CCATGCGCGC ACTGGAGCTG
GGCGCCATCG ACTTCGTGGC CAAGCCGCGC GTGGGTGTCT CCAACGGCCT GCAGGAACTG
GCCGCGCAGA TCGTGGACAA GATCCGCGTT GCTGCCGTGG CCCAGGTACG GCGTCTGCCG
GTCGCTCCCC GCAGTGCCGC CTCTGCCGCA GGCAGCGCGG CAGCGCCGGT CGCTTCCTCT
GCAGGTTCGG CCGTGCCGCG CCAGGCTGCA CCGACGTCGC TGCTGGGGCG GCTTTCCACG
GAGAAGCTGG TTGCCATCGG CGCCTCCACG GGTGGCACCG AGGCCATCCG CGAAGTGCTC
ACCCATCTGC CGGCCGACTG CCCGGCCATC GTCATCACCC AGCACATGCC GCCGGGCTTC
ACCACCAGCT TCGCGGCCCG GCTCAACAGC CTGTGCCAGA TGACCGTGAA GGAAGCGCAG
CACGGCGAGC GCCTGCTGCC CGGTCATGCC TATATCGCCC CGGGTGGCAA GCACTTCTCC
GTGCAGCGCA GCGGCGCCAA CTATGTCGCC GTGGTCGATG ACAGCCCGCC GGTGAATCGC
CACAAGCCTT CGGTCGAAGT GCTGTTCAAG TCGGTGGCCG TCTGCGCGGG CCGCAACGCC
TACGGCATCA TGCTCACCGG CATGGGCGCC GATGGTGCGG TCGCCATGCG CGAAATGCGC
GATGCAGGCA GCTACAACCT CGTGCAGGAC GAGGCCAGCT GCATCGTCTT CGGCATGCCG
CGCGAGGCCA TCGCCCACGG CGCTGCCGAC GAAGTGCTGC CCCTCAACCA GATCGCCGCC
GCCTTGCTGG GCAAGCTGCG CATAGGTTCG GACCAGGTGC ACCACCGCAT CTGA
 
Protein sequence
MDRKIRVIVV DDSALVRSLL SEIINRQHDM ECIGSANDPL IAREMIREMN PDVITLDVEM 
PRMDGIDFLG RLMRLRPMPV VMISTLTERG AEVTMRALEL GAIDFVAKPR VGVSNGLQEL
AAQIVDKIRV AAVAQVRRLP VAPRSAASAA GSAAAPVASS AGSAVPRQAA PTSLLGRLST
EKLVAIGAST GGTEAIREVL THLPADCPAI VITQHMPPGF TTSFAARLNS LCQMTVKEAQ
HGERLLPGHA YIAPGGKHFS VQRSGANYVA VVDDSPPVNR HKPSVEVLFK SVAVCAGRNA
YGIMLTGMGA DGAVAMREMR DAGSYNLVQD EASCIVFGMP REAIAHGAAD EVLPLNQIAA
ALLGKLRIGS DQVHHRI