Gene Daci_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0629 
Symbol 
ID5746172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp694735 
End bp695475 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID641295698 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_001561660 
Protein GI160896078 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCA TCATCTACAC CTCCATGACG GGCGCCAACG CAGCGGCGCA GCGTCAGTCC 
GTGCTGGCCC ACAACCTGGC CAATGCCGGC ACCAACGGCT TCCGGGCCGA AATGTCCACC
TTCCGCTCCG TGCCCCTGCA GGGCAGCGGC GCGGGCACGC GCGTGTTCGC GCTGGAGGCG
ACCTCCGGCT ACGTGGACAC GCCCGGCCCC ACCCAGCGCA CGGGCCGCGC ACTGGACGCC
ATGGCCATGG GCCGCGCCTG GTTCGCCGTC CAGGGCCTGG ATGGCCAGGA GGCCTACACG
CGCAACGGCG TGTTCGAAGT CTCCCCCGAG GGCCAACTGG TCAACAGCAA CGGCCAGGCC
GTGCTGTCCG ACGGCGGCGG CCCCATCGAC ATTCCCCCCG AGTCCACGAT CACGCTGGGC
TCGGACGGCA CGCTGACCGC CAAGACCGGC AACCAGCTGC CCGTGGCCGT GGGCCGCGTC
AAGCTGGCCA CGCCGCCCGA GGACACCGCG CTGGTGCGCG GCAATGACGG CCTGTTCCGC
ACGGGCGACG GCGATCCGCT GCCCAACGAC GAGAACGCAC GCCTGCTGTC CGGCGCCATC
GAAGGCTCGA ACGTGAACTC GGTGGAGACC ATGGTCGGCA TGATTGCCGC CGCCCGCCAA
TTCGAGACCC AGATGCGCCT GCTGCAGACG GCAGAAACCA ATGACAAGAC GGCCAGCCAA
CTCTTGAGCA TGAACGGCTG A
 
Protein sequence
MDRIIYTSMT GANAAAQRQS VLAHNLANAG TNGFRAEMST FRSVPLQGSG AGTRVFALEA 
TSGYVDTPGP TQRTGRALDA MAMGRAWFAV QGLDGQEAYT RNGVFEVSPE GQLVNSNGQA
VLSDGGGPID IPPESTITLG SDGTLTAKTG NQLPVAVGRV KLATPPEDTA LVRGNDGLFR
TGDGDPLPND ENARLLSGAI EGSNVNSVET MVGMIAAARQ FETQMRLLQT AETNDKTASQ
LLSMNG