| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0600 |
|---|
| Symbol | |
|---|
| ID | 5746143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 663792 |
|---|
| End bp | 664967 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641295669 |
|---|
| Product | type III secretion exporter |
|---|
| Protein accession | YP_001561631 |
|---|
| Protein GI | 160896049 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
|---|
| TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCCA GCCAAGACAA AAGCCTTCCC GCCACCGAAC GCAAACTGCA GAAAACGCGT
TCTGACGGCC AGGGTGCGCG CTCTCGGGAC CTGTCGCACC TGGCCATCCT GGGCACGGGC
GCGCTGATGA TGCTGATGGG CGCCGAGCCC CTGATCCAGC ACCTGCGCAT GGCACTGGCC
CAGCAATTGG CCTTCGACGC GCACACGGCC AAGACGCCGG CCCTGATGAT GGAGCGCATG
CTGTCCATGG GCAGCCTGGG CCTGAAGATT TCCCTGGTCG TTGCCGCCGT GACCACGGGT
GCGGCGCTGG TGTCGGGCAT GCTGGCCGGC GGCTGGATCC TGAGCCTCAA GCCCATCCAA
CCGCAGTTCA ACCGCCTCAA TCCGCTGTCG GGCCTGACCA ACCTGTTTTC CAAGCAGCAG
ATGGTGACCG TGGTGAAGAT GGTGGTGATG ACGGCCATCC TCTCCTTCGT GGCCTGGAAG
TTCCTGAGCA GCCATCTCGC CGAGATCGCC GCCATCTCCT CACAGCCCTC GGCCATGGCG
CTGTCCATGA CGGGGCAATG GCTGGCCAGC GGCGTCGCCC TGCTGCTGCT GGTGGTGTTC
CTGATGGCCG TGATCGACGT GCCGCTGCAG GCCTACCTGT TCAAGTCGCG CCTGAAGATG
AGCCATGAGG AAGTCAAGCA GGAGCACAAG GAATCCGACG GCAACCCGCA GATCAAGAGC
AAGATCCGCC AGAAGCAGCG CGAGATCGCC GACCGCGCCA GCGTCAACGC CGTGCCGCGC
GCCGACTTCG TGGTCACCAA CCCCACGCAC TACGCCGTGG CCCTGCGCTA CGACGAAAAG
ACCATGGCCG CCCCGCAGGT CATCTCCAAG GGCACGGACC TGGTGGCGCT GAAGATCCGC
GAAGTCGCGG GCGCCCACAA GATCCCGGTG CTCGAATCCC CCATGCTGGC GCGCGCCCTG
TACGCGCACG CCGACCTGGA CCAGGCCATT CCCGCCGCGC TGTACACGGC CGTGGCCCAG
GTCCTGGCCT ATGTCTACCG CCTGAAGGCC GCGCTGCGCG GCGAAGGCCC CATGCCTGGC
GATCTCGGCG AACCCGTCGT GCCCGCCGAA CTCGATCCGC ACCAGGGCCG CCGCGCGCCA
GGCGCCGCCG CGACCACTGA AGGTACTGCT CCATGA
|
|---|
| Protein sequence | MDSSQDKSLP ATERKLQKTR SDGQGARSRD LSHLAILGTG ALMMLMGAEP LIQHLRMALA
QQLAFDAHTA KTPALMMERM LSMGSLGLKI SLVVAAVTTG AALVSGMLAG GWILSLKPIQ
PQFNRLNPLS GLTNLFSKQQ MVTVVKMVVM TAILSFVAWK FLSSHLAEIA AISSQPSAMA
LSMTGQWLAS GVALLLLVVF LMAVIDVPLQ AYLFKSRLKM SHEEVKQEHK ESDGNPQIKS
KIRQKQREIA DRASVNAVPR ADFVVTNPTH YAVALRYDEK TMAAPQVISK GTDLVALKIR
EVAGAHKIPV LESPMLARAL YAHADLDQAI PAALYTAVAQ VLAYVYRLKA ALRGEGPMPG
DLGEPVVPAE LDPHQGRRAP GAAATTEGTA P
|
|---|
| |