| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0563 |
|---|
| Symbol | |
|---|
| ID | 5746106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 616593 |
|---|
| End bp | 617459 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641295632 |
|---|
| Product | YdjC family protein |
|---|
| Protein accession | YP_001561594 |
|---|
| Protein GI | 160896012 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG TACCTGCCAG AAACAACGGG GAGAAGGCCT TGGCCAGAAC CGTCGTCCTG
TGCGCCGACG ACTATGCGCT GCACCCCCTG GTCGATGAAG CCGTGGAGCA GCTCACGCTG
CAGGGCCGGC TGTCGGCCAC CAGCTGCATG ACCACCTCGC CGCACTGGAG GCAGGCCGCC
AGGCGCCTGC CCGCGCTGCG CCCGCGCCTG TCGCTGGGCC TGCACTTCAA CCTGACCGAA
GGCCACGGCC TGCAGCCCGC CGCCGGCATC GGTGCCGTGA TCGCGCGCGC CTATGCCGGC
GCACTCGGCG GCACCGCCAT GCGCGACGCC TGGCGCCGCC AGCTCGACGC CTTCGAGGAC
GCGCTGGGCA TGGCCCCCGA CTTCATCGAC GGCCACCAGC ACGTGCACCA GCTCCCCGGC
GTGCGCGCCG CGCTGGTGCA GGAATTACGC CAGCGCTATG GCGACAACGC CGACGACCTG
CCCTGGGTCC GCTCCACCAC CCCGGCCGGC CAGCTCTGGC GCGACCCCAA GGCCGCCATC
ATCGCCTTGC TGGGCGGCTG GACCACCACC CGCCGCCTGC GCCGCCAGGG CGTGCCGCTC
AACCACGGCT TCGGCGGCGT CTACGCCTTC GACCAGCCCA CGCCCGAAGG CTATGGCCGC
CACATGGCCC AATGGCTGAC CCAGCTGCAG CCCGGCAGCC TCATGATGTG CCACCCCGCC
ACCGCCCCCG TCCAGGGCGA CGCCATAGGC GCCCAGCGCG CCGTGGAATA CGCCTACCTG
CGCTCCGACG CCTTCGCCCA GGCCCTGGAA CAAGCGCACT GCCACATCGC CCAAGGCCCC
CTCACCCCGC TGTTCACATC GAACTAG
|
|---|
| Protein sequence | MNTVPARNNG EKALARTVVL CADDYALHPL VDEAVEQLTL QGRLSATSCM TTSPHWRQAA
RRLPALRPRL SLGLHFNLTE GHGLQPAAGI GAVIARAYAG ALGGTAMRDA WRRQLDAFED
ALGMAPDFID GHQHVHQLPG VRAALVQELR QRYGDNADDL PWVRSTTPAG QLWRDPKAAI
IALLGGWTTT RRLRRQGVPL NHGFGGVYAF DQPTPEGYGR HMAQWLTQLQ PGSLMMCHPA
TAPVQGDAIG AQRAVEYAYL RSDAFAQALE QAHCHIAQGP LTPLFTSN
|
|---|
| |