Gene Daci_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0517 
Symbol 
ID5746060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp553958 
End bp554287 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content70% 
IMG OID641295586 
Productcupin 2 domain-containing protein 
Protein accessionYP_001561548 
Protein GI160895966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0622754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCG AACACGCAAA GCCACTGGAG GTCATCGCCC TGCACGCCCG CGACGGCATG 
CCCATCAGCA CCAGCCTGAT CCGAACGCCG AAGCTGCAAC TGCTGCGCCT GGTGCTGCCA
CCGGGCCATG CCCTGCCCAG CCATCAGGTC CCCGGCGAGG CCACCATCCA CTGCCTGGCG
GGCGAGGCCG GCATTGCCAC GCGCCTGGCA AGCCTGCGGC TGGTGGCCGG CTCGGTGGTG
CTGGTGCCTG CCGGCGAGCT GCACGATGTG CACGCGCGCG GCGACCAGGG CTGCGTGCTG
TTGGTGACGA TTGCGGGCGC GAACGACTGA
 
Protein sequence
MALEHAKPLE VIALHARDGM PISTSLIRTP KLQLLRLVLP PGHALPSHQV PGEATIHCLA 
GEAGIATRLA SLRLVAGSVV LVPAGELHDV HARGDQGCVL LVTIAGAND