Gene Daci_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0419 
Symbol 
ID5745956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp452468 
End bp453340 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content59% 
IMG OID641295482 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_001561450 
Protein GI160895868 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG GTAAGGAAAT TCGCGGCAAG ATCAAATCGG TGGAAAACAC CAAGAAGATC 
ACCAAAGCCA TGGAAATGGT GGCCGCATCC AAGATGCGCA AGGCGCAGGA ACGGATGCTG
GCTGCACGCC CGTACAGCGA AAAGATCCGC AACATTGCAG TCCATCTTGG CCAAGCCAAC
CCCGAGTACG TGCACCCGTT CATGCAAGTG AACGGTGATG CAAAGACAGC CGGCGTCATC
GTGGTGACGA CGGACAAGGG GTTGTGCGGC GGCATGAACA CCAACGTGTT GCGTGCTGTC
ACGGCCAAGC TGCGGGAGCT GCAGGATCAA GGCGTGTCGG CAGAAGCAGT GGCCATTGGC
AACAAGGGTC TGGGCTTTCT GAACCGTGTC GGCGCCAAGG TGGTTTCGCA CGCGACGGGT
CTGGGCGATA CGCCCCATCT GGAAAAGCTG ATCGGCCCTG TGAAGGTGCT GCTCGATGCA
TATGCAGCGG GCAAGCTGAG CGCGGTGTAC CTGAGCTACA CCAAGTTCAT CAACACCATG
AAGCAGGAAT CGGTGGTGGA GCAGTTGCTG CCCCTGTCGT CCGAGAGCAT GCAGGCCGAG
AAGACGTCTG GCCATAGCTG GGACTACATC TACGAACCCG ACGCGCAGTC CGTGATCGAC
GAGCTGCTCG TGCGCTACGC AGAGTCCCTG GTCTACCAAG CTGTCGCGGA AAACATGGCG
TCCGAGCAAT CGGCGCGCAT GGTGGCCATG AAGGCCGCTA CCGACAACGC CGGCAACGTC
ATCAGCGAGT TGAAGCTGGT CTACAACAAG ACGCGTCAGG CAGCCATCAC GACCGAACTG
TCGGAAATCG TGGCTGGCGC CGCTGCTGTG TAA
 
Protein sequence
MAAGKEIRGK IKSVENTKKI TKAMEMVAAS KMRKAQERML AARPYSEKIR NIAVHLGQAN 
PEYVHPFMQV NGDAKTAGVI VVTTDKGLCG GMNTNVLRAV TAKLRELQDQ GVSAEAVAIG
NKGLGFLNRV GAKVVSHATG LGDTPHLEKL IGPVKVLLDA YAAGKLSAVY LSYTKFINTM
KQESVVEQLL PLSSESMQAE KTSGHSWDYI YEPDAQSVID ELLVRYAESL VYQAVAENMA
SEQSARMVAM KAATDNAGNV ISELKLVYNK TRQAAITTEL SEIVAGAAAV