Gene Daci_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0371 
Symbol 
ID5745908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp413326 
End bp413826 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID641295434 
Producthemerythrin-like metal-binding protein 
Protein accessionYP_001561402 
Protein GI160895820 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2703] Hemerythrin 
TIGRFAM ID[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGC TGGAATGGAG CGGAGCGCTG GCATTGGAGT TGCCGGCCAT GGACGAGGTG 
CATCAGGAGT TCGTCCTGCT GCTGGCCGAG GTGGAGGCGG CCGATGATGC GCAGCTGTGC
GCGCGCTGGG ATGAGTTGAT CGCGCATACG CAGGTGCATT TCGACCAGGA AGACCGCTGG
ATGCAGTCCA CGCGCTTCAC CAGCACCAAC TGCCACAGCC TGCAGCACAA GGTGGTGATG
CAGGTGATGC GCGAGGGGGC GGCCAAGGCG GTGGCCGGTG ATCTGGCCGT GATCCGCAGC
ATGGCAGGCG AGCTGGCGGC CTGGTTCGTG CACCATGCGC AAACCATGGA TGCGGCGCTG
GCCCTGCATC TGCGCAGTGC GGGCTTCGAT CCCGCCACGG GCTCCCTGGC GCACCCTGAG
GCCTTGCCCG AGCAGCCCAT CACGGGCTGC GGCGGTGCCT GCGACGGCAG CGCCGACCGC
GCGCGGGCCG TGCCGGCCTG A
 
Protein sequence
MAVLEWSGAL ALELPAMDEV HQEFVLLLAE VEAADDAQLC ARWDELIAHT QVHFDQEDRW 
MQSTRFTSTN CHSLQHKVVM QVMREGAAKA VAGDLAVIRS MAGELAAWFV HHAQTMDAAL
ALHLRSAGFD PATGSLAHPE ALPEQPITGC GGACDGSADR ARAVPA