| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0364 |
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| Symbol | |
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| ID | 5745901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 405644 |
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| End bp | 407500 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295427 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001561395 |
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| Protein GI | 160895813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAA AAAAGGAGTC CAGCGCGCTT TCCCTCTCGA CAGTGCGCAT GCCGTCCGCA
CAATGGGCCG AAGCACCAAC CCCGGCTCCC AAGGACGCTC CGGCCCGCAG CGGGCGCCCG
CCCATCTCCA TGAGCAACAC CACCTTCGAC TACATCGTCA TCGGCGCCGG CACGGCGGGC
GCCCTCCTGG CCAATCGGCT TTCGCGCGAT GGCCGCAGCC GCGTGCTGCT GATCGAGGCG
GGCGCCAAGG ACGACTACCA CTGGATCCAC ATCCCCGTGG GCTACCTGTA CTGCATCGGC
AATCCGCGCA CCGACTGGCT CTACCAGACC GAGCCCGACG CAGGGCTCAA CGGCCGCAGC
CTGCGTTATC CGCGCGGCAA GACGCTGGGC GGCTGCTCCA GCATCAACGG CATGATCTAC
ATGCGCGGCC AGGCCCGCGA CTACGACGGC TGGGCCGAGC TGACCGGGGA CGACGCCTGG
CGCTGGGACC AGGTGCTGCC GGCCTTCCGC CAGCATGAAA GCCATTGGCG GCTCGATGCC
GGCGGCAACG CCGATGCGGG CTTTCGTGCC CTGCACGGCG GCACGGGCAC AGGCGGCAGC
GCTGAATGGC GCGTGGAGCG GCAGCGCCTG CGCTGGGACA TCCTGGACGC CTTTGCCGAA
GCCGCGCAGC AGGCCGGCAT TCCGGCCACA GAGGACTTCA ACGGCGGCAG CAACGAGGGG
GTGGGCTACT TCGAGGTCAA CCAAAAGGGC GGCCTGCGCT GGAACACCGC CAAGGCCTTC
CTGCGGCCCA CCTGCTATGG CCGCCCCAAT TTCGAGCTGT GGACCCATGC CCAGGTCAGC
CAGCTGCTGT TTGAACAGCT GCCCGCCGGC GGCCTGCGCT GCAGCGGCGC CCAGGTCTGG
ACCGGCTCGG AAATGGTCAA CGTGCAGGCA AGCCAGGAGG TGCTGCTGTG CGCGGGCGCC
GTCAACTCCC CGCAGATCCT GCAGCTGTCG GGCATCGGCC CGGGCGCGCT GCTGCAGAAC
CACGGCATTG CCGTGCGCCA CGACCTGCCC GGCGTGGGCG AGAACCTGCA GGACCATCTG
CAGATCCGCT CGGTCTACAA GATCAAGGGC GCGCGCACGC TGAACACCAT GGCCAATTCG
CTGTGGGGCA AGGCCGGCAT CGGACTGGAA TACCTGCTGC GCCGCAGCGG GCCGATGAGC
ATGGCGCCCT CCCAGCTGGG GGCCTTCACG CGCAGCAGCC CGCAGCAGGA GCACCCCAAT
ATCCAGTACC ACGTGCAGCC GCTGTCGCTG GACGCCTTCG GTGAGCCGCT GCACGGTTTT
CCGGCCTTCA CGGCCAGCGT CTGCAACCTC AATCCCACGA GCCGGGGCAC GGTGCGCATC
CACAGCGGGG ACTTCCGCCA GGCGCCGGCC ATTGCGCCGC ACTACCTGTC CACACCCGAG
GACCGGCAGG TGGCCGCCGA CAGCCTGCGC GTGACGCGCC GCATCGTCGG CCAGAGCGCA
CTGGCGCGCT TCGCGCCCGA GGAATGGAAG CCCGGCGTGC AGTACCAGAG CGACGAGGAT
CTGGCGCGCC TGGCCGGCGA CATCGCCACC ACCATCTTCC ACCCCGTGGG AACCACGAAG
ATGGGCCGCG CCGACGACCC CATGGCCGTG CTGGACAGCC GCCTGCGCGT GCGCGGCGTA
CAGGGGCTGC GCGTGATCGA TGCAGGCGCC ATGCCGCGCA TCACCAGCGG CAACACCAAC
AGCCCCACGC TGATGATGGC GGAGAAGGCC GCCGGCTGGA TTCTTGCGGA CCGGCAGGGG
CAGGGCCAGG AGACCGCACG GGAGAGCACG GAACCGGCCG TGGCGCTGGC CGCCTAG
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| Protein sequence | MLQKKESSAL SLSTVRMPSA QWAEAPTPAP KDAPARSGRP PISMSNTTFD YIVIGAGTAG
ALLANRLSRD GRSRVLLIEA GAKDDYHWIH IPVGYLYCIG NPRTDWLYQT EPDAGLNGRS
LRYPRGKTLG GCSSINGMIY MRGQARDYDG WAELTGDDAW RWDQVLPAFR QHESHWRLDA
GGNADAGFRA LHGGTGTGGS AEWRVERQRL RWDILDAFAE AAQQAGIPAT EDFNGGSNEG
VGYFEVNQKG GLRWNTAKAF LRPTCYGRPN FELWTHAQVS QLLFEQLPAG GLRCSGAQVW
TGSEMVNVQA SQEVLLCAGA VNSPQILQLS GIGPGALLQN HGIAVRHDLP GVGENLQDHL
QIRSVYKIKG ARTLNTMANS LWGKAGIGLE YLLRRSGPMS MAPSQLGAFT RSSPQQEHPN
IQYHVQPLSL DAFGEPLHGF PAFTASVCNL NPTSRGTVRI HSGDFRQAPA IAPHYLSTPE
DRQVAADSLR VTRRIVGQSA LARFAPEEWK PGVQYQSDED LARLAGDIAT TIFHPVGTTK
MGRADDPMAV LDSRLRVRGV QGLRVIDAGA MPRITSGNTN SPTLMMAEKA AGWILADRQG
QGQETAREST EPAVALAA
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