Gene Daci_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0322 
Symbol 
ID5745859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp362060 
End bp363013 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content69% 
IMG OID641295385 
Productmannosyltransferase OCH1-related enzyme 
Protein accessionYP_001561353 
Protein GI160895771 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3774] Mannosyltransferase OCH1 and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC TGAAACTGAA AACCCGGGGC GAGCTGTGGC TGGCGGCGGG CATGCGCCGC 
TTCTACGCCA CCTTCGCACG CCGCCTGGAG CAGGGCCCCG CGCCCGACTT CCGCAGCCAT
GACATCGGGC CTGCGGCGCC CGTGCCCGTC TCCACGCCCA TACCCCGCAT CATCTGGGCC
TACTGGAATG GCGACTCGGT GCCGCTGCTC ATACAGCGCT GCTTTGACAA CTGGGCCCGC
CTGAATCCCG GTTACAGCCT GCGCATCCTC AACGACGCGC AACTGCCGCA ATACGTGCCG
CAGCTGCCCG GCAACCTGCA GCAGCTGCCC GTGGCCAAGC GCTCGGACTG GCTGCGCCTG
GAATTGCTGC ACCGCCACGG CGGCATCTGG CTGGACGCCA GCACCATCCT CACCGAGCCG
CTGGACTGGC TGCTGGAGCA GCAGCAACGC AGCGGCGCCG ACCTGGTCGC CTACTACCTG
GAGCGTTACA CCCGCGACCC GCAGGTGCCC GTGGTCGAGA ACTGGCTCAT GGCCGCCCCC
CCGGGCAGCG CCTTCATCGC GGCCCTGCAC AAGGAATACG TGGAACAGGT CCTGCCGCAG
ACGGGCGAGG CCTATATCGC CCAGCTCCAG CAGGCCGGCG AATACGAGCA ACTGCGCCAG
GGCATCGACA TGCCCGCCTA CCTCAGCATG CACCTGGCCA TGCAGCGCGT GCTGCGCGCC
GGCGGCAGCT ACCGCCTGCG GCTGGCCAAG GCCGAGGACG GCCCCTTCTT CCTGCACGTG
CAGGGTAACT GGGGCCGCAC CCCGCTCAAG ATCCGCCTGA TGTTCTCGCG CACCGAAAAG
GCGCCCGTGC CGCTGATCAA GCTGCGCGCG CCCGACCGCA AGAAGCTGGA CCTGTACCTG
GAGCGCGGCC TCTACGTGCC CGGCAGCATC GCCGACCGCT ACCTGCGGGG CTGA
 
Protein sequence
MSGLKLKTRG ELWLAAGMRR FYATFARRLE QGPAPDFRSH DIGPAAPVPV STPIPRIIWA 
YWNGDSVPLL IQRCFDNWAR LNPGYSLRIL NDAQLPQYVP QLPGNLQQLP VAKRSDWLRL
ELLHRHGGIW LDASTILTEP LDWLLEQQQR SGADLVAYYL ERYTRDPQVP VVENWLMAAP
PGSAFIAALH KEYVEQVLPQ TGEAYIAQLQ QAGEYEQLRQ GIDMPAYLSM HLAMQRVLRA
GGSYRLRLAK AEDGPFFLHV QGNWGRTPLK IRLMFSRTEK APVPLIKLRA PDRKKLDLYL
ERGLYVPGSI ADRYLRG