| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0230 |
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| Symbol | |
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| ID | 5745766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 259409 |
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| End bp | 260215 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295292 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001561261 |
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| Protein GI | 160895679 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCC CCCTGACAAC CCGCCGCGCA TTCATCCGCA CCGCCCTGGC GGCCGCCACC
CTGGCCGCTG CCGGCCTGGG CGGCGCAGCC CATGCCGACA TGCTGGCCAA CATCCAGAAG
GCCGGCGTGC TGCGCGTGGC GATTCCGCAG GACTTCCCGC CCTTCGGCTC GCTGGGCACC
GACCTGAAGC TGCAGGGCTA TGACATCGAC ATGGCGGCCC TGGTCGCCCA GGAGTTGGGC
GTGAAGGTGG AGCTGGTGCC CGTGACCAGC ACCAACCGCA TTCCCTTCCT GACCACGGGC
AAGGCCGACA TCGTCATCTC CAGCCTGGGC AAGAACGCCG AGCGCGCCAA GGTGATCGAC
TTCACCCAGG CCTATGCGCC CTTCCCCAAG AGCGTCTACG GCCCCAAGGA CGTGAGCATC
AAGGCCCCTG CCGACCTGGC CGGCAAGACC GTGGGCGTGA CGCGCGGCTC CACCGAGGAC
CTGGCCCTCA CGCAGGTGGC GCCGGCCTCG GCCACCATCA AGCGCTACGA GGACAACAAC
GCCACCGCGC AAAGCTATCT GACGGGCCAG GTGCAGTTGG TGACGCTGGG CAACATCGTG
GCCAACGCCG TCAACGAGCG CACCAGGCTG CGCCAGCTGG ACGTGAAGTT CGCGGTCGAG
GACACGCCCT GCTACATCGG CGTGGCCAAG GGCGAGCCGG CGCTGCTGCA GAAGGTGGAC
GCCATCATCA CCAAGCTCAA GGCCGACGGC CGCCTGACCG GCCTGTCCCA GCGCTGGATG
AAGATGCCGC TGCCCGCCAC CCTGTAA
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| Protein sequence | MTSPLTTRRA FIRTALAAAT LAAAGLGGAA HADMLANIQK AGVLRVAIPQ DFPPFGSLGT
DLKLQGYDID MAALVAQELG VKVELVPVTS TNRIPFLTTG KADIVISSLG KNAERAKVID
FTQAYAPFPK SVYGPKDVSI KAPADLAGKT VGVTRGSTED LALTQVAPAS ATIKRYEDNN
ATAQSYLTGQ VQLVTLGNIV ANAVNERTRL RQLDVKFAVE DTPCYIGVAK GEPALLQKVD
AIITKLKADG RLTGLSQRWM KMPLPATL
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