| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0216 |
|---|
| Symbol | |
|---|
| ID | 5745752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 244318 |
|---|
| End bp | 245229 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641295278 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001561247 |
|---|
| Protein GI | 160895665 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTCC CCGCTGACCA GGTGCCGCTG TTCCTTGCCG TGCTGGACCA CGGCTCCTTT
TCTGCCGCCG CACGCCGGCT GGGGCGGGTG CCCTCGGCCG TGAGCATGGC CATCGCCCAG
CTGGAGGCGG AGCTGGACCT GCAGCTGTTC GACCGCAGCG GCCGCGAGCC CCGGCCCACG
GCGGCGGCGC GCGCACTGGA GCCCCAGGCC CGGCTGCTGG CCGCCCAGCT GCAGCAGCTC
AACCACCAGG CGCTGGCCCT GCACCAGGGA CTGGAGGAGC GGCTGACCCT GGTGATCGCG
CCCGAGCTGC TGTCCACGGC CTGGGCCGCG CCGCTGCAGC CGCTGGTCGA GGAATTCCCG
GGGCTGGAGG TGGAGGTGCT GGTGGCCGCC CAGGTCGATG CGCTCAAGGA ACTGCATTCG
GGCCGCGCGC ATCTGGCCCT GGTCTTCGAG CGCCCGGCCA TCGACGGCCG CGAGGATTTC
CAGGAGATGG GCCAGGAAAC CATGGTCGCC GTGATGGCGG CCAGGCACCC GCTGGCCCGG
CAACTGGGCG TGGACGGTCA GCAGCGCCTG GACGTGGGCC AGTTGGCCGG CGCGCGCCAG
ATCCTGCTGG CCAGCCGCGA CCTGGCCCAC ACCGATCCGC GCTTCGTGTT CTCGCACCAG
CTGTGGCGCA CGGACAGCCA CCTGGCAGCC CTGTCCCTGG TCTCGGCCGG CCTGGGCTGG
GGGTGGCTGC CCTTCAGCGT CGCCGAGCCC CTGCTGCAAA CGGGCGCGCT GCTGCGCATC
CCGCTGTGCA ACATCAGCAA CGGCACCCAG CTGTTCGTCG ACTGGGTGTG GTCCAAGGAG
CGCCCGCTGG GGCTGGCGGC GCGGCGGTTC GTGGAGCAGC TGCAGGTGCC GGTGCAGTTG
GAGCCCAGGT GA
|
|---|
| Protein sequence | MSFPADQVPL FLAVLDHGSF SAAARRLGRV PSAVSMAIAQ LEAELDLQLF DRSGREPRPT
AAARALEPQA RLLAAQLQQL NHQALALHQG LEERLTLVIA PELLSTAWAA PLQPLVEEFP
GLEVEVLVAA QVDALKELHS GRAHLALVFE RPAIDGREDF QEMGQETMVA VMAARHPLAR
QLGVDGQQRL DVGQLAGARQ ILLASRDLAH TDPRFVFSHQ LWRTDSHLAA LSLVSAGLGW
GWLPFSVAEP LLQTGALLRI PLCNISNGTQ LFVDWVWSKE RPLGLAARRF VEQLQVPVQL
EPR
|
|---|
| |