| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0160 |
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| Symbol | |
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| ID | 5745696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 174545 |
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| End bp | 176521 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641295222 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001561191 |
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| Protein GI | 160895609 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.346916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.409193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC CGCAACCCAC ACGCGCCGAG ATCTACGAGC GCATCAAGGC CTCCAGCAAA
CAGGAAGTCA TCCTCGACGA GATGCAGCGC CTGGGCTTCT GGCCCAAGGG CGAGGGACAG
CCGCAGCTGG CCGCAGCCCA CATCCAGCGC GAAGGCGAGC TGCAGCGCGA ACTGGCCGAG
CTGCGCCAGC AGATCGCCGT GCGCCAGAAC CCCGAGCGCG CATTGCGCCA GATGCGCAAG
GAGCGCATGC AAAAGGCGCT GGCCCAGCGC GAGGAAACCA AACGCCGCCA GGCCCAGGAG
CGCCACGACA AGGCGCTGGC CTGGCATGCG AAGCGGGCCA CGCACGTGGG CTATCTGGGC
CCCGGCGTCT CCGCTGCCCT GCAGGGGCCG CAGGCCGGTG AGGCACCGCC TGCTGCCGGG
GAACGCCGGC AGGCCGACCC GCAAAGGCTG GCCCGGCATG GCCTGCCGGA ACTTGCCGAT
GCGGCGCAGC TGGCCGATGC CATGGGCATC AACGTGGCCG AGCTGCGTTT CCTGGGCTTC
CACCGCGAGG TGGCCCGCAC CCACCACTAC CACTCGTTCA CCCTGCCCAA GAAGACCGGC
GGCGAGCGGC TGATCTCCGC GCCCATGCCG CGCCTCAAGC GCGCGCAGTA CTGGGTGCTG
GACAACATCC TCGCCAAGGT GCCCGCGCAC GATGCCGCGC ACGGCTTCCT GGCCGGCCGC
TCCATCGTGA GCAATGCCGC GCCGCATGCG GGCCACGACG TGGTCATCAA CCTGGATGTG
AAGGACTTCT TTCCCAGCAT TGCCTTCGGC CGCATCAAGG GCGTGTTCCG GCATCTGGGC
TATGGCGAGG CCATCGCCAC CCTCCTGGCC CTGCTGTGCA GCGAAAACCG CGCCCAGGCC
TGGCAGGTGG ATGGCGAGAA GCTCTTCGTC GGCGGCAAGG CGCGCGAGCG CGTGCTGCCC
CAGGGCGCGC CCACCAGCCC CATGCTCACC AACCTGCTGT GCCGCCGCCT GGACCGCCGC
CTGCTGGGCC TGGCCAGGCA GCTGGGCTTT GTGTACACGC GCTATGCGGA CGACCTGACC
TTCTCGGCCT CGGGCGAGGC CGCGCGCGAC AACGTGGGCC GGCTGCTGGG CCGCGTGCGC
TGGATACTGC GCGACGAAGG CTTCACGCCC CACCCCGACA AGGAGCGCGT GATGCGCAAG
GGCCGCCGCC AGGAGGTCAC GGGGCTGGTG GTGAACGCGG ACAAGCCCGG CGTATCGCGC
GAAACGCGCA GGCGCCTGCG CGCCGCCCTG CACCGCGCCA CGCAGGCCAG CGCCGGCAAG
CCGGCGCACT GGCAGGGGCA GGCAGCCCAG CCCTCGCAAT TGCTGGGACT GGCGCAGTTC
GTGTACCAGG TCGACCCCGT GCAGGGCGGC CCGCTGCTGG GCCAGGCCCG CCAGCTCACG
CGCAGCCCCA TCGACCGCGC CAACGATGCC CTTCTGCAGG CCAGCCGGCA GGACCGCGCG
GCAGCGCGTG CGCAGCCGCC CGCAAGCGCA CAGTTCCGGC GTCTGGCCGC CAGCGGGCAG
GCTCCCGCGC TGGCCAGCGG CAAGACGTGG TGGCAGCCGG CCGAGCCGGC GGCACCCGTG
GTCGAGAAAA CCGACCAGCA GCGGCGCGAA CAGCGGCTGC AAGAGCGCGA GGCCGCACGC
GCCCAGGCAG CGGCGGCCGC CCGGCCGGCC GTGGACACGC AGCAGCAGCA GCCCGCACAG
GCGCCGGGCC CCGACGCACA GGCCCCTGGC CCATCGCCGA TGCCCGGCCT GCTGACCTAC
TGGGCGCAGA TCGTGATCTG CTTCTTGCTG GGCACGGTGT TCCAGGCACG CCTGATCACG
CTGATCGGCA TCGTGCTGGT CCTGCTCCTG CGCTACCGGC GCATACGGCG CTGGGATGTC
TTTGCCGCTG CGATGGTGGT GGCCGTGCTG CTGGGCCTGG GGTTGCGGCT GTCGTGA
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| Protein sequence | MSQPQPTRAE IYERIKASSK QEVILDEMQR LGFWPKGEGQ PQLAAAHIQR EGELQRELAE
LRQQIAVRQN PERALRQMRK ERMQKALAQR EETKRRQAQE RHDKALAWHA KRATHVGYLG
PGVSAALQGP QAGEAPPAAG ERRQADPQRL ARHGLPELAD AAQLADAMGI NVAELRFLGF
HREVARTHHY HSFTLPKKTG GERLISAPMP RLKRAQYWVL DNILAKVPAH DAAHGFLAGR
SIVSNAAPHA GHDVVINLDV KDFFPSIAFG RIKGVFRHLG YGEAIATLLA LLCSENRAQA
WQVDGEKLFV GGKARERVLP QGAPTSPMLT NLLCRRLDRR LLGLARQLGF VYTRYADDLT
FSASGEAARD NVGRLLGRVR WILRDEGFTP HPDKERVMRK GRRQEVTGLV VNADKPGVSR
ETRRRLRAAL HRATQASAGK PAHWQGQAAQ PSQLLGLAQF VYQVDPVQGG PLLGQARQLT
RSPIDRANDA LLQASRQDRA AARAQPPASA QFRRLAASGQ APALASGKTW WQPAEPAAPV
VEKTDQQRRE QRLQEREAAR AQAAAAARPA VDTQQQQPAQ APGPDAQAPG PSPMPGLLTY
WAQIVICFLL GTVFQARLIT LIGIVLVLLL RYRRIRRWDV FAAAMVVAVL LGLGLRLS
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