Gene Daci_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0130 
Symbol 
ID5745666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp140921 
End bp141862 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content69% 
IMG OID641295192 
Productalpha/beta hydrolase fold 
Protein accessionYP_001561161 
Protein GI160895579 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.513647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGG CCGATGGATT CGACGCCGTT CAGCGCAGCG AGCCTGCCAC GGGGCTGGAC 
AACGTTTGCG TGACCGAGCA TGAATTCGTC ATGCCCGGCA CGGGCGTGGC CGCGCGCACC
GGCGTGCTGC TGGTGCACGG GCTTACGGGC ACGCCGGCCG AGATGCGCCT GCTGGCCAAG
GGGCTGAACA AGCAGGGCTT CACCGTCTAT GCGGTCCAGC TGGCCGGCCA TTGCGGCAGC
ATGGAAGATC TCGTGGACAC GCGCTGGACC GACTGGCTGG CCAGCGTGGA GGCCGGCCTG
CAGCGGCTGT CGCAGCACAT GGACCATGTG GTGGTCGGAG GCCTGTCCAT GGGCGCCGTG
CTCTCCCTGG CCGTGGCCCA GCGCCACCCC GACAAGGTGG ACGGTGTCTG CGCCCTGTCC
ACCACCTTCC GCTACGACGG CTGGAGCATT CCCTTCTACA CGCGCCTGGC CTTTTTGCTG
CCGCTGTTCC GCGCACTGGG CATTGGCCGC CACAGCGTGT TCATGAAGCA GCCGCCCTAC
GGCATCAAGG ACGAGGCCCT GCGCGCGCGC GTGGTCGAGC AAATGCATTC GGGCGACAGC
GCGGCGGCCG GCCTGCCGGG CAATCCCTGG TGGTCCATCA TCGAGCTGCG CCGCCTCTCG
GCCCATGTGC TGGCGCGACT GCCCCAGCTG CGCTCGCCCT GCCTGGTCAT CCATGCGCGC
AACGACGACA TCTCGTCGGT GGCCAACGCC CATGACATCG TGCATGGCGC CAGCCAGGCC
CATGTCGAGC TGGTGCTGCT GGACAACAGC TACCACATGG TCACCATAGA CCGCGACCGC
CGCACCGTGA TCGCGCGCAC CACCGAATTC GTGGCGCGCA TCGCCAGCGG TGCCGCCCCC
CGCGAGGTGC GGGCTGCGGA GGCCGCACGG CATGGGCAGT GA
 
Protein sequence
MNMADGFDAV QRSEPATGLD NVCVTEHEFV MPGTGVAART GVLLVHGLTG TPAEMRLLAK 
GLNKQGFTVY AVQLAGHCGS MEDLVDTRWT DWLASVEAGL QRLSQHMDHV VVGGLSMGAV
LSLAVAQRHP DKVDGVCALS TTFRYDGWSI PFYTRLAFLL PLFRALGIGR HSVFMKQPPY
GIKDEALRAR VVEQMHSGDS AAAGLPGNPW WSIIELRRLS AHVLARLPQL RSPCLVIHAR
NDDISSVANA HDIVHGASQA HVELVLLDNS YHMVTIDRDR RTVIARTTEF VARIASGAAP
REVRAAEAAR HGQ