Gene DET1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1566 
Symbol 
ID3229158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp1409852 
End bp1410541 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content48% 
IMG OID637121124 
ProductMerR family transcriptional regulator 
Protein accessionYP_182263 
Protein GI57233695 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000201032 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATAA GTGAAGTCGC GAAAGCGGCG GGTGTTTCTC TGCCGACTAT TCACTACTAC 
ACCCGTGAAG GCTTACTGTC CCCCTTGCTC AAAACTGCCC CCAATATGGC TTACTACAGC 
CCTGACTGTG TTGAGGATAT CCGGTTAATC AAAGAACTCC AATCAGAAAA ATTCCTTCCT 
TTGTCTGTAA TAAAACTCGT ACTGCAAGCC AGGCGGGACG GACAGGATAT TGAGCATCTT 
GGGGAGATGC GTACTCTCCT GGATGATGTA TTTCAGCCGG TAGTCACAGG AGAGCCTAAC 
CCGCTGACGG CAGGTGAGCT GATGAATGCC TCTGGGTTGT CTGCTCCGGA GATTAAGGGC 
CTGCAATCAA TGGGTCTGCT GGTGCCCCGA AAAACCGCCA AGGGTGATGT GTATGATGAT 
ATTGACCTGC GTGTGGCCGG TATTATTAAA GAACTGGCCG GGTTTGGTCT GGAACTGAAT 
GACCTGGGTA TTTATAGCCG GTATATTGAG GTAATACGTA ACGAAGCCGA TGAAATACAT 
AACAAAATTC ATCATATGCG CGGTATGGAT ACGGTGCCCG TAGCCAGGCT GTTTAGTACC 
CTTAATAGCT TAAAAGCCTA TTTGGCTACA AGGGTTTACC GCCAAGCTTT AGAGATGCAC 
CAACAGGATA TGGATAAGAA AGAGAGTTAA
 
Protein sequence
MRISEVAKAA GVSLPTIHYY TREGLLSPLL KTAPNMAYYS PDCVEDIRLI KELQSEKFLP 
LSVIKLVLQA RRDGQDIEHL GEMRTLLDDV FQPVVTGEPN PLTAGELMNA SGLSAPEIKG 
LQSMGLLVPR KTAKGDVYDD IDLRVAGIIK ELAGFGLELN DLGIYSRYIE VIRNEADEIH 
NKIHHMRGMD TVPVARLFST LNSLKAYLAT RVYRQALEMH QQDMDKKES