Gene DET1540 details

Gene Information

• Locus tag: DET1540
• ID: 3229185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1389612
• End bp: 1390289
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637121098
• Product: DNA-binding response regulator
• Protein accession: YP_182238
• Protein GI: 57233722
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAC TTATTATTGA AGATGATTAC AAGATAGTGC AGGCAATATC TTTTGCTTTG 
AAAATAGGCT GGCCTGATGT GACCCTGCTG AGCGCTTCCC GCGGGGAAAG CGGGCTCAGG 
ATGATTGAGG AACAAAGGCC CAACCTGGTT ATCCTTGACC TGAGCCTGCC GGATATGGAC 
GGGCTGGAAG TTCTGAAAGA CGCCCGGCTT TTCTGTGATA CCCCCATTAT TATTTTGACG 
GTACGCTCGG AAGAATCTGA TGTAGTGGAG GCGCTGGAGC TGGGGGCAAA CGAATATATC 
ATAAAACCCT TCCGCCAGAT GGAGCTGCTG GCCAGGATAC GTTGCATACT CCGCCGCCCC 
ATAACCACCA GCAAAGATGC CCTGCTGGAA TGGGGGCCGT TTAAACTGGA TTATTTTAAA 
AGGCTGCTGT TTATAAATGA GAAAACTGTC ATCCTGACCA CTATTGAAAG CCAGATTATG 
CATGAACTTC TTAAAGATGC CCCCAATATA GTAACGTATT CAAGGCTGTC CGAACTAATT 
TCGGGGGGGC ATTATCCAGA AGTGGTTAAC AGCATAAAGG TCCATGTATA TAACCTGAGG 
CATAAACTTG AGGCGGATTC CTATGCCCCG AAATATATTA TGAATATGCA TGGGGTTGGT 
TATTTTCTAT CCAAGTAA 

 

Protein sequence

MKILIIEDDY KIVQAISFAL KIGWPDVTLL SASRGESGLR MIEEQRPNLV ILDLSLPDMD 
GLEVLKDARL FCDTPIIILT VRSEESDVVE ALELGANEYI IKPFRQMELL ARIRCILRRP 
ITTSKDALLE WGPFKLDYFK RLLFINEKTV ILTTIESQIM HELLKDAPNI VTYSRLSELI 
SGGHYPEVVN SIKVHVYNLR HKLEADSYAP KYIMNMHGVG YFLSK