| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1524 |
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| Symbol | |
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| ID | 3229218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1376763 |
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| End bp | 1377455 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637121082 |
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| Product | DNA binding response regulator |
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| Protein accession | YP_182222 |
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| Protein GI | 57233755 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.731193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAT TAATAATATG CAATGACTCA CAAGTTTTAA AAGACCTGGT ACTGTGCCTC
AAAATCCGTT ATCAAAATCT GGAATACACG GTATCTGACA ATATTAGTGA CGGGATAGGC
CTGATAGAAA CAATCTCGCC GGATATCATA TTCTTGGATT CCTGTTTATG TGATGCTGCT
GCCCAAAATA TAATTATCAG TATCCGGGAG TTTTCTGATA TACCCATTAT TATCCTGAAT
TCCATCGGGG AAATCGGCAG CAAGGTTCAG TTTCTGGAAG ACGGGGCAGA TGAATGTGTG
GAAAAGCCGA TAAACGGCAT TGAATGCCAG GCGGTTACCA ATGCATTGTT GCGGCGTAAC
CTCAATTTGG GGTTTAAGAC CGAAAGCACG ATACCTATCA GTAACGGGCT GGAGGTTAAT
TTTAACCGGC GGGAATTAAC CCTGTTCGGT TCCCCTGTCC ATCTGACGCC TATTGAATTT
AGTCTGCTGG CTGTGCTCAC CCGGAACAGC GGTCAGGTAC TTACCTACAG GATATTGCTT
GAAAAAGTAT GGGGTACAGA ATACAGCGGG GATTTAAATC TTTTGAAAAA ACATATCCAT
AATCTTAGGT CCAAAATAGA GGCAAATCCG GAGTACCCCA AGATTATTAT TACCGAACGA
GGGTTGGGTT ACAGTCTTAT CAGGCAGTTC TAA
|
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| Protein sequence | MKILIICNDS QVLKDLVLCL KIRYQNLEYT VSDNISDGIG LIETISPDII FLDSCLCDAA
AQNIIISIRE FSDIPIIILN SIGEIGSKVQ FLEDGADECV EKPINGIECQ AVTNALLRRN
LNLGFKTEST IPISNGLEVN FNRRELTLFG SPVHLTPIEF SLLAVLTRNS GQVLTYRILL
EKVWGTEYSG DLNLLKKHIH NLRSKIEANP EYPKIIITER GLGYSLIRQF
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