| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1492 |
|---|
| Symbol | |
|---|
| ID | 3229278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1349459 |
|---|
| End bp | 1350298 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637121052 |
|---|
| Product | peptide ABC transporter, permease protein |
|---|
| Protein accession | YP_182192 |
|---|
| Protein GI | 57233815 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC TTAAAAAACT GACCGCAAAT AAACTCCTGT TCTTCGGGGT GGTACTTCTG
GGGATATTCG TGCTTTCAGC GGTATTTGCT CCGCTGATTT CCCCGCATGA CCCGTGGACT
TACGGACAGG CTTTTCTGCA CCCTTCTGCC CAGCATCTGC TGGGGACTAA TGACGTGGGG
CAGGATATAT TTTCCGAGCT GGTTTATTCT GCCAGAGTAT CCCTGTGGGT AGGTTTTGTA
TCTGCCTCTC TGGCTACTTT GCTGGGGGTG GCGGTGGGTA TCTGGGCAGG ATTCCGCCGC
GGCTGGCTGG ATAATGTACT GATGGGTATG GCTGATATAT TTCTGGTTAT ACCGGCTCTG
CCTCTGGTAA TACTCCTTTC GGTATATCTG GGACCCAGTA TCTGGAATAT TATTCTGGTT
ATCGCCCTGA CTCTCTGGCC GGGGACGGCA CGGGTAATCC GTTCGCAGGT GATTACTATC
CGCCAGAGCG GTTACGTGGA ATCCGCCCGT ATTATGGGGG CAAGTGAATT CCGCCTGATG
TGGCGGCATG TACTTCCGAA TGTATTGCCA CTGGTGGCTG CAAAGTTTAT TCTGGCGGTG
GCGGTGGCCT TGCTCCTTGA GGCTTCCATG AGTTTTCTGG GTCTGGGTGA CCCGTCTCAA
AAAAGCTGGG GCATGATGCT TCATTATGCT TTTTCACGGG GAGGATTTGT CCAGAACCTG
TACTGGTGGT ATCTGCCGCC GGGACTGTGC ATTACCCTGT GCATACTGGG GCTGACCTTT
ATCAATATGA GTTTTGAAGA CCGTACTGAT CCCCGGTTGC AAAGGATACT GGACAGATGA
|
|---|
| Protein sequence | MNILKKLTAN KLLFFGVVLL GIFVLSAVFA PLISPHDPWT YGQAFLHPSA QHLLGTNDVG
QDIFSELVYS ARVSLWVGFV SASLATLLGV AVGIWAGFRR GWLDNVLMGM ADIFLVIPAL
PLVILLSVYL GPSIWNIILV IALTLWPGTA RVIRSQVITI RQSGYVESAR IMGASEFRLM
WRHVLPNVLP LVAAKFILAV AVALLLEASM SFLGLGDPSQ KSWGMMLHYA FSRGGFVQNL
YWWYLPPGLC ITLCILGLTF INMSFEDRTD PRLQRILDR
|
|---|
| |