Gene DET1487 details

Gene Information

• Locus tag: DET1487
• Symbol: trpB
• ID: 3229283
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1344698
• End bp: 1345897
• Gene Length: 1200 bp
• Protein Length: 399 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637121047
• Product: tryptophan synthase subunit beta
• Protein accession: YP_182187
• Protein GI: 57233820
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0133] Tryptophan synthase beta chain
• TIGRFAM ID: [TIGR00263] tryptophan synthase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAAAG TAGATAGCAC CGGTAAACCG GGGTATTTCG GCAAGTATGG CGGGCAGTTT 
GTACCTGAAA TACTGGTGCC AGTCCTAAAC GAACTGGAAC AGGCTTATGA ACAAGCCAAA 
AAAGACGAGA CTTTCCAGTC ACGCCTGAAA TCCCTTTCAA ACACCTTTTC GGGGCGGCCC 
ACTCCGCTGT ATCTGGCAGA AAGGCTGACT GAACATCTGG GGGGTGCCAG AATTTACCTG 
AAAAGGGAAG ACCTGGCCCA TACAGGTGCC CATAAAATCA ACAACGCACT CGGTCAGGGG 
CTGCTTGCCT TGCATATGGG AAAGAAAAGG GTAATTGCCG AAACAGGGGC GGGGCAACAC 
GGGGTAGCCA CCGCAGCTGT TTGCGCCATG CTGGGGCTGG AATGCATTGT CTATATGGGC 
GAAGATGACA TCAAACGTCA AGCCTTGAAC GTATTCCGCA TGAAGCTGAT GGGAACGGAA 
GTCAGAAGCG TATCTTCGGG CAGCCGTACC CTGAAAGACG CCATCAATGA AGCTATGCGT 
GACTGGGTAA GCAACCCGGA GACCACTTAT TATATAATCG GTTCGGTGGT CGGCCCGCGC 
CCTTATCCGG CTATGGTACG GGATTTTCAG GCAGTTATCG GGCAGGAAAC CAAAGCCCAG 
TCCTTAAGAC AGCTGGGGGG ACTACCTGAC TGCATTGTTG CCTGTGTTGG CGGAGGCAGC 
AATGCCATGG GTATTTTCTA TGATTTCATA CCAGACCAAA GCGTACGTCT TATCGGGGTG 
GAAGCTGCCG GCAGCGGCAT CAGCACCGGC AAACATTCGG CCACCCTTAG TGCCGGCAAG 
GTGGGTATAC TCCACGGCGC CATGTCCTAC CTGCTTCAGG ACGAGCATGG ACAGGTGATT 
GAAACCCACA GTATTTCGGC CGGGCTGGAT TATCCCGGCG TAGGACCTGA ACACAGCTAC 
CTGAAAGATA ATAAGCGGGT GGAATATGTT TCGGTCACAG ATGAAGAAGC CCTGAACGGC 
TTCAAACTGC TATGCTCGCT GGAAGGGATA ATGCCTGCTC TGGAATCTTC CCACGCCATT 
GCCCATGCCC TGAAAATAGC AGTCGGCATG CCGAAAAACA AAAATATAGT CATAAACCTC 
TCCGGCAGAG GGGACAAAGA CATGGATATT GTTCAAAAAG CAATGGGGGT AAAGATATGA 

 

Protein sequence

MPKVDSTGKP GYFGKYGGQF VPEILVPVLN ELEQAYEQAK KDETFQSRLK SLSNTFSGRP 
TPLYLAERLT EHLGGARIYL KREDLAHTGA HKINNALGQG LLALHMGKKR VIAETGAGQH 
GVATAAVCAM LGLECIVYMG EDDIKRQALN VFRMKLMGTE VRSVSSGSRT LKDAINEAMR 
DWVSNPETTY YIIGSVVGPR PYPAMVRDFQ AVIGQETKAQ SLRQLGGLPD CIVACVGGGS 
NAMGIFYDFI PDQSVRLIGV EAAGSGISTG KHSATLSAGK VGILHGAMSY LLQDEHGQVI 
ETHSISAGLD YPGVGPEHSY LKDNKRVEYV SVTDEEALNG FKLLCSLEGI MPALESSHAI 
AHALKIAVGM PKNKNIVINL SGRGDKDMDI VQKAMGVKI