Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1454 |
Symbol | |
ID | 3230573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1313785 |
End bp | 1314441 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637121014 |
Product | 50S ribosomal protein L25/general stress protein Ctc |
Protein accession | YP_182157 |
Protein GI | 57235101 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.128254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGTA TCAGCCTGGC ACTTAATCCC CGGCAGGTTT TCGGCAACAA AAACAAATTC CTGAGGGCTC AGGGAATAAC CCCGGTCCAC ATCTTCGGTC ACGGCCTGAA ATCACTGGCA CTTCAGGCAA ACACCCAGGA ACTTGAGTCT ACCATCAGCC GGGCGGGCAG TTCCCACCTG GTAAGCCTAA AACTGGATAC GGACAAAAAG ACCCGCAAGG CATTTATACG TGAAATACAG CGCCACCCGG TAAAAGGCTA TCTCCAGCAC GTAGATTTTT ACCAGATAAA CCTGAAAGAG AAAGTAACAG CGGAAATCCC CATCCATTTC AGCGGGGAGT CACCCCTTCT CAAAGAAAAA GGCCACAAAC TGACCGCCCC CTTTACCCAC CTTACGGTTG AAGCCCTGCC GGATGACCTT CCGCCGGAAA TACATATTGA GCTATCCCAG TTTGACAGTC CGGAAAAAGA CCTTTACATA AAAGATATCG TTCTGCCCGG CAATGCCCGC ATACTGAACG AGCCTGACCT TCTGGTGGCC AAAGTAAGCG AAATCCACCT TAAGGTTGAA ACCCCGGTAA CAGCCAGCCT GCCTGAAGAA CCCGAAGAAA AACCGGCTGC CGCTGCCGAA GAAAAAGAAA CCGCTGAAAA GGAATAA
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Protein sequence | MTGISLALNP RQVFGNKNKF LRAQGITPVH IFGHGLKSLA LQANTQELES TISRAGSSHL VSLKLDTDKK TRKAFIREIQ RHPVKGYLQH VDFYQINLKE KVTAEIPIHF SGESPLLKEK GHKLTAPFTH LTVEALPDDL PPEIHIELSQ FDSPEKDLYI KDIVLPGNAR ILNEPDLLVA KVSEIHLKVE TPVTASLPEE PEEKPAAAAE EKETAEKE
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