Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1378 |
Symbol | |
ID | 3229321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1243822 |
End bp | 1244433 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637120940 |
Product | hypothetical protein |
Protein accession | YP_182089 |
Protein GI | 57233857 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000187393 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGTCTGC CATATTTAGA ACATGTTTTA TGTATTTATT GGTGCAATCG GTTTTTCACT GGTACATATC TTGATTTTGT GGCCCTGAAA AAACTGCCGC TTCTCAAGCC CATACTCTGG CTTTCGGGTT CAACCCTGCT GGTGTATGCC GGTTTTATGG TCTGCTTCAA CGGAAATTCA TTCTTACTGC CCGTCTGGCT GAATGCCGCC GGCTGGGCGG TATTTGCAGC AGGCATCTAT TTCTTTCTTT ATTCCCTCTT TGTAAATCTG CCCTTCGGTA AAACTTATGT CAAAACCGGA GTGGGAGACA AACTGGTTAC CAGCGGGTTT TACGCCCTGG TACGTCACCC CGGCGTACCC TGGTTTGTAC TGGCCATGGC CGGTATGACC CTGGGTGCGG GCACGGACTT TGCCCTGTGG GCGGCCGTTA TCTGGAGCCT TTTGGATATA TTGCTGGTAT ACATACAGGA CCGCTGGGTA TTCGGAAAAA TGTTTCCGGG CTATGCCCAG TATCAAAAAA CCACCCCCAT GCTGATACCC AACCGCAAAA GCATTGCGGC TTATATAAAA CAGCGTAATT TTTCAAATAC TATACAAGGA GAAGCAAAAT GA
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Protein sequence | MCLPYLEHVL CIYWCNRFFT GTYLDFVALK KLPLLKPILW LSGSTLLVYA GFMVCFNGNS FLLPVWLNAA GWAVFAAGIY FFLYSLFVNL PFGKTYVKTG VGDKLVTSGF YALVRHPGVP WFVLAMAGMT LGAGTDFALW AAVIWSLLDI LLVYIQDRWV FGKMFPGYAQ YQKTTPMLIP NRKSIAAYIK QRNFSNTIQG EAK
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