| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1360 |
|---|
| Symbol | |
|---|
| ID | 3229354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1231137 |
|---|
| End bp | 1231481 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637120922 |
|---|
| Product | general secretion family protein |
|---|
| Protein accession | YP_182071 |
|---|
| Protein GI | 57233889 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4970] Tfp pilus assembly protein FimT |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000388019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAATT TCATGAAGAA ACTCCGCAAG CACCAGAAGG GCTTTACCCT GATTGAGCTT
CTGGTAGTGG TAGCCATTCT GGGCGTTCTG GCGGCCGTAG TTGTTCCTAA CGTTGCCAAG
TTCATTGGTT CCGGTAAGAC TGAGGCTATG GCAACAGAAT TGCATACAAT TCAGTTGGCT
GTTACAGCTT ATATGGCTGA TAATACCACT GATCAGTTGC CAGCAGCTAT TGCTAAAACC
AATAGCTTTA GTGGGACTGC TATTGCCCCG TATCTGGTGA CTTTGACTAC TGAATTTTAC
TATGCCATTA CAACTGCGGG TGTAGTGACA CAAACTGAGT CTTAA
|
|---|
| Protein sequence | MYNFMKKLRK HQKGFTLIEL LVVVAILGVL AAVVVPNVAK FIGSGKTEAM ATELHTIQLA
VTAYMADNTT DQLPAAIAKT NSFSGTAIAP YLVTLTTEFY YAITTAGVVT QTES
|
|---|
| |