| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1324 |
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| Symbol | |
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| ID | 3229421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1201992 |
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| End bp | 1202900 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120886 |
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| Product | hypothetical protein |
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| Protein accession | YP_182035 |
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| Protein GI | 57233956 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000450557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAACA GAGTATTTGT CAGCGGCGGC AGCGGTTTTG TAGGCGGGCA TTTGCTGCCC
CGGCTGGCTG AAAACGGCTT TAAAATCCGT CTGCTGGTTA TGAATGAGGC CGAAGCCAAA
CGGGTAAAAA CCCCCGGAGT GGAGTTTGTG TATGGTACGG TAAATGACCT GCCGGTGCTT
ATGGAGAGTA TGAAAGATAT CTTTGCCGTA ATCCATCTGG TGGCCATACT GCGTGAAAAT
AAAGATATTA CCTTTGAGAA GGTAAATATA GAGGGCACAA AAAACATGCT GGCGGCGGCT
GACCAAAACG GGGTGAAAAG ATTTATTCAC ATGGGGATAC TGGGTGCCAG TGCCGACCCC
CGTTTTACTT ACCTCCATTC CAAGTATCTG GCTGAAGAAG CGGTCAGTAA GTCCGGTCTG
GATTACAGCA TTTTAAAGCC TTCGGTCATG TTCGGGCAGG GAGCAGGTTT TATAACTGCC
CTTATCCGTT CATTTAAGCC CTATCCCTTA CTTGCCCCGG TTGCCGGAAA CGGCAAAACC
CGCCTTCAGC CCATTTGGGT GGAGGACGTG GTCAGCTGCC TGCTGAAAAT GCTGGACGGG
GAAAAGATAC ATCAGAGCGT ACAGATTGGC GGACCCCGGA TATTTACTTA TGATGAGGTT
CTTTTGGCGG TGATGCAGGC TATGGGGGTA AAAAAGCCCC GTTTGCATGT ACCGGTGGGT
TTAATGCGTC CGCTGGTCTG GCTGATGGAA CGCACCAGTT CCAACCCGCC CATTACTCTG
CCGGAGTTGA AAGCTTTGTC GGTAGACAAT ATAACTGCCG AAGATGCCGT AAAGACAGAG
TTCGGCTTTG ACCCCAAGCC TCTTTCGGAA GGGCTTGATT ACCTTAAGCC AGCTCCAGCC
GTTCCTTAG
|
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| Protein sequence | MTNRVFVSGG SGFVGGHLLP RLAENGFKIR LLVMNEAEAK RVKTPGVEFV YGTVNDLPVL
MESMKDIFAV IHLVAILREN KDITFEKVNI EGTKNMLAAA DQNGVKRFIH MGILGASADP
RFTYLHSKYL AEEAVSKSGL DYSILKPSVM FGQGAGFITA LIRSFKPYPL LAPVAGNGKT
RLQPIWVEDV VSCLLKMLDG EKIHQSVQIG GPRIFTYDEV LLAVMQAMGV KKPRLHVPVG
LMRPLVWLME RTSSNPPITL PELKALSVDN ITAEDAVKTE FGFDPKPLSE GLDYLKPAPA
VP
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