| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1143 |
|---|
| Symbol | |
|---|
| ID | 3229619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1045366 |
|---|
| End bp | 1046187 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637120707 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_181858 |
|---|
| Protein GI | 57234152 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2339] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACC TGAAGAAAAT TAAAACCTAT CTGACCACTT ACCGCTGGAC CTGGGTACTG
GTAGGCGGGC TGGGACTGTT TTTAGTTGCC GACCAGCTTA TCAAGCTGAC CGGCGGGGCT
AACTTTTTGC CGCTACTGGT AGTGCTGGGT GCCTTTATCA TGCCGGTAAC CTTTGTCGTA
TTTATCTATG AGCGTTTGCC TCTGGCGAAC AAAAATATCC GCTGGGTGCT GGCCAGTTTC
TTTGTGGGCG GGATAATCGG GCTGATTATG GCAGGTTTGC TGGAATATGC TACTGTCTCC
AACCTGAACC TGTCAGGGTT GTTTGTGGTG GGAGTTATTG AAGAAGCTGC CAAACTGATA
TTCCCGATGC TGCTTTTCTG GGGCGGAGGT TTCCGGGCTG AGGCTAACGG GGTTTTATTC
GGAGTGGCAG CCGGAATGGG CTTTGCCGCT TTGGAAACGA TGGGTTATGG GGTGGTTAGC
CTTATCCAGA GCCAGGGGGA TATAAATATC TTGGAGCAGG TGCTTCTTTT CCGGGGCTTG
TTTTCACCTG CCGGGCATGC CGCCTGGACT GGTATAGTCT GTGCCGTGCT GTGGAGACAG
CGCGCCGAAT ATGGCAGAGG GCCGCTTAAT CTGGCAGTTA TACTGGCTTT TATGCTGGCT
GTGGCACTGC ATATTGTCTG GGATATAGCC AGCGGGCTGA ATCTGCCCGG TGTCTGGGCG
GCGGTAGTGC TGCTGGCGGT GGCCGCATTA AGTTTGCTGT TACTAGTAAG GGCTATACGC
CATGCCCGCT ACCAGTTGCG CCGGGAGGAT TTTTCGGTTT AA
|
|---|
| Protein sequence | MNYLKKIKTY LTTYRWTWVL VGGLGLFLVA DQLIKLTGGA NFLPLLVVLG AFIMPVTFVV
FIYERLPLAN KNIRWVLASF FVGGIIGLIM AGLLEYATVS NLNLSGLFVV GVIEEAAKLI
FPMLLFWGGG FRAEANGVLF GVAAGMGFAA LETMGYGVVS LIQSQGDINI LEQVLLFRGL
FSPAGHAAWT GIVCAVLWRQ RAEYGRGPLN LAVILAFMLA VALHIVWDIA SGLNLPGVWA
AVVLLAVAAL SLLLLVRAIR HARYQLRRED FSV
|
|---|
| |