| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1006 |
|---|
| Symbol | |
|---|
| ID | 3229719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 917227 |
|---|
| End bp | 918258 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637120570 |
|---|
| Product | permease, putative |
|---|
| Protein accession | YP_181726 |
|---|
| Protein GI | 57234252 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0459509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTA TCCTGAGTTT GCTGGCGGGC GGCTTTTCCG CCCTGCTGGA ATACCTTTCC
GCCCACGTGA TAGCCTGTCT GGTTCCGGCA TTTTTTATTG CCGGGGCTAT TTCGGTTTTC
CTTGACCCGT ACATAGTCAC CAAATATTTC GGCAGTAAAG TAAACCCGTT TGTCTCATAC
AGCATTGCCT CTATTTCAGG GTTTATACTG GCCGTATGCT CCTGCACTGT TTTGCCGCTT
TTTGCCGGTA TTTACAAACG CGGCGGAGGT ATCGGCCCGG CAGTCACCTT TCTTTATTCC
GGCCCGGCCA TAAGTATTCT GGCTGTCTCA CTGTCTGCCG GGGTACTTGG CTACGATATC
GGTATTGCCA GAGCTATCTT TGCCATCATA TTTTCTATAC TAATCGGGCT TATTATGGCC
TACCTGTTCC GCAAAGATAA GCCGGATACC GCCCAGCAGA TAACCAGCCT GCCCGCAGAT
ACGGCCGCCA AACGCCCCCT ATACCAGACC TTGATTTATT TCGGCAGTCT GATTGCCATA
CTTATATTCG CATCCGCCAA AAATATACCC GTATTCCTGC TGGCACTTTT AGTATTGCTC
TTCTGCCTGT GGCGGTTTTT CAATATGTCT CAGATAAAAG AATGGCTTTC CGAAACATGG
CGTTTTGTGA AGCTTATTTT CCCGTGGCTG GTAGGCGGCA TTTTTATAGC CGGGGTTTTA
AAAACCCTGA TTCCGGCTGA TTTTATCACC AGCTACGTGG GCAGCAATAA CCCTGTTTCA
AACCTTATAG CCTCGCTTTC GGGGGCGTTA CTCTATTTTG CCACCCTGAC CGAAGTCCCT
ATAGTCAAGG CATTTGTTGA TTTAGGTATG GCCAAAGGCC CGGCACTGGC TCTGCTGCTG
GCAGGACCGG CTGTTTCTTT ACCCGGTTTC CTGGTTATCC GCAAAATACT GGGTAACCGC
AAAGCCCTCA CTTATATAGG GCTGGTAATC ATTAGTTCAA GTTTAGCCGG GTTTATATTC
GGCATATTCT AA
|
|---|
| Protein sequence | MDFILSLLAG GFSALLEYLS AHVIACLVPA FFIAGAISVF LDPYIVTKYF GSKVNPFVSY
SIASISGFIL AVCSCTVLPL FAGIYKRGGG IGPAVTFLYS GPAISILAVS LSAGVLGYDI
GIARAIFAII FSILIGLIMA YLFRKDKPDT AQQITSLPAD TAAKRPLYQT LIYFGSLIAI
LIFASAKNIP VFLLALLVLL FCLWRFFNMS QIKEWLSETW RFVKLIFPWL VGGIFIAGVL
KTLIPADFIT SYVGSNNPVS NLIASLSGAL LYFATLTEVP IVKAFVDLGM AKGPALALLL
AGPAVSLPGF LVIRKILGNR KALTYIGLVI ISSSLAGFIF GIF
|
|---|
| |