| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0760 |
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| Symbol | def |
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| ID | 3229925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 700563 |
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| End bp | 701066 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637120324 |
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| Product | peptide deformylase |
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| Protein accession | YP_181493 |
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| Protein GI | 57234458 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0435683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATAC GCCGCATCTG TGAGTTGCCT GAGCCTATAT TAAGGAAGAA GGCTAAAAAA
GTACCGTCTA TTGACGGCTC TATTCAAACA CTCATTGATG ACATGATTGA AACCATGAAG
AGCGCTGACG GAGCAGGGCT TGCTGCCCCG CAGGTAGGCG TATCTCTAAG GCTGATAGTT
TTCCGCGAAC CGGACGCTAA AGAAGCCACA GTGCTTATTA ACCCTGAGAT TGTGAAAAAA
GAAGGGCAGA GACAGGTGAC CGAAGGCTGC CTTTCCATTC CAGGTTATTT TGGTGAACTT
ACCAGAGCCG AAACTGTCAC TGCCAAGGGG CTTGACCGCC ACGGTAAGGC TTTCCGCATA
AAAGGTACCG GTGTTGTTGC CCAGCTGCTG GAACATGAAA CCGAACACCT GGACGGAATA
CTTTATATAG ACCACCTTGA GAGTGAAGAA AAACTGCATG AGATACAGCC GGAAGATGAA
ATACCCGAAG AAATCCGTGA TTAG
|
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| Protein sequence | MAIRRICELP EPILRKKAKK VPSIDGSIQT LIDDMIETMK SADGAGLAAP QVGVSLRLIV
FREPDAKEAT VLINPEIVKK EGQRQVTEGC LSIPGYFGEL TRAETVTAKG LDRHGKAFRI
KGTGVVAQLL EHETEHLDGI LYIDHLESEE KLHEIQPEDE IPEEIRD
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