Gene DET0740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0740 
SymboldapF 
ID3229959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp681298 
End bp682152 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content49% 
IMG OID637120304 
Productdiaminopimelate epimerase 
Protein accessionYP_181475 
Protein GI57234492 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112553 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CTAAGTTACA AAGTGTAGGT AATGACTTTG TGCTGATAGA CCCTCAGGGT 
GAGGATAAAG ACTGGTCAAA ACTGGCACTC CACATGTGCC ACCGGCATTT CGGTGCCGGG
GCTGACGGGC TGATGCTTAT TTTACCTTCA GCCAAAGCTG ATTTCCGTAT GCGGATATTT
AACGCGGACG GCTCTGAGGC CGAAATCTGC GGCAACGGTC TGCGTTGTCT TATTCATTAC
ATAGCTGCCA ACAATCTGAT TGGCAACAGG GATGAACTAA GCATTGAGAC TCTGGCAGGC
ATACGCAATG CCCAGATATT TGCCGACGGG CGGATACGTA CCACCATGGG TAAACCCATG
TTTGAAGCCC ACCAAATACC TGTTGCCGCC GAACCGGACC CCAAATACTA TAACGGGCAG
CTTATTTCTG ACTTTCCGTT AAATATCAAT AACCGCAGAT TACTCCTTTC CCTGGTATCC
ATGGGCAACC CCCATGCCAT ACACTTTTGC ACCAAATCTG TAGAAGAATT CCCCCTAGGT
GAAGTTGGCC CACTGGTGGA AACTCATAAA GCCTTTCCCA AACGCACTAA CTTTGAGGTT
GCAAACATTC TGGACAGTGA ACATATCAAA GTACGTGTTT GGGAACGGGG GGTAGGGGAG
ACTCTGGGCT GCGGCAGCGG AGCATCTGCC GTGGCGGTTG CCGCCCAAAT ACTTGGGTAT
GTCGGAAAAT TTGTTTACAT AAAGTTACCG GGCGGAACAC TGGGCGTTGA GTGGGATGGC
CATAATGACG TCTATCTGAC CGGAAAAGCT GAAATTATAT ACACGGGAGA ATGGTTGAAA
GATGAAACTG TCTAA
 
Protein sequence
MKFTKLQSVG NDFVLIDPQG EDKDWSKLAL HMCHRHFGAG ADGLMLILPS AKADFRMRIF 
NADGSEAEIC GNGLRCLIHY IAANNLIGNR DELSIETLAG IRNAQIFADG RIRTTMGKPM
FEAHQIPVAA EPDPKYYNGQ LISDFPLNIN NRRLLLSLVS MGNPHAIHFC TKSVEEFPLG
EVGPLVETHK AFPKRTNFEV ANILDSEHIK VRVWERGVGE TLGCGSGASA VAVAAQILGY
VGKFVYIKLP GGTLGVEWDG HNDVYLTGKA EIIYTGEWLK DETV