Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0676 |
Symbol | |
ID | 3230022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 624603 |
End bp | 625265 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637120241 |
Product | ribulose-phosphate 3-epimerase, putative |
Protein accession | YP_181418 |
Protein GI | 57234554 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAAGACG TAAAGATAGT GCCGGCTGTA CTTACCGATG ACCCTGCGGC CTTTGAGTGT ATGCTAAACC AGCTGGAGAG TTTTGCTCCT TCTGCCCAGA TAGATATTAT GGACGGGCAG TTTGTGCCTT CGCTAAGCAT CCCACCTGAA GTACTGGGCA GATACAAGCC CCGTTTTGCC TCTGAAATAC ACCTGATGAC CCTTAATCCA GAAGAATACC TTACCTATTG CAAGCAGCAC GGCGCTTTCA GGGTAATATT CCATTTTGAA GCAACAACCC GCCCCGAATA TGTTATCAGC AGGATAAAGG AATTGGGTTT TCAAGCAGGG CTGGCGGTGA ACCCTGAAAC ACCTGTTTCA GATTTTGCTT ATCTGGTGCC GCAGCTGGAC ATGGTGCTTT TTATGTCGGT TATTCCCGGT TTTTACGGCG CGCCGTTTAT ACCTGAGGTG CTCCTGAAGG TAAAAGAGTT TAAACGCCGT TTTCCCGAAA CTGAAATAGG TCTGGACGGC GGTGCTAAAG AGGGCAACAT ACCTGAGATT GTGGCGGCCG GGGTAAATGA TATATGCGTG GGAAGTGCTA TCTTCCGGCA AACTGACCCT AAGTCAAGCT ACCTGTATTT GGATAAACTG GCTAAAAATG CCTCCAAAGA AGCGGGTATT TAG
|
Protein sequence | MKDVKIVPAV LTDDPAAFEC MLNQLESFAP SAQIDIMDGQ FVPSLSIPPE VLGRYKPRFA SEIHLMTLNP EEYLTYCKQH GAFRVIFHFE ATTRPEYVIS RIKELGFQAG LAVNPETPVS DFAYLVPQLD MVLFMSVIPG FYGAPFIPEV LLKVKEFKRR FPETEIGLDG GAKEGNIPEI VAAGVNDICV GSAIFRQTDP KSSYLYLDKL AKNASKEAGI
|
| |