Gene DET0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0642 
Symbol 
ID3230087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp593592 
End bp594254 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID637120207 
Productribulose-phosphate 3-epimerase, putative 
Protein accessionYP_181384 
Protein GI57234619 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGACG TAAAGATAGT GCCGGCTGTA CTTACCGATG ACCCTGCGGC CTTTGAGTGT 
ATGCTAAACC AGCTGGAGAG TTTTGCTCCT TCTGCCCAGA TAGATATTAT GGACGGGCAG 
TTTGTGCCTT CGCTAAGCAT CCCACCTGAA GTACTGGGCA GATACAAGCC CCGTTTTGCC 
TCTGAAATAC ACCTGATGAC CCTTAATCCA GAAGAATACC TTACCTATTG CAAGCAGCAC 
GGCGCTTTCA GGGTAATATT CCATTTTGAA GCAACAACCC GCCCCGAATA TGTTATCAGC 
AGGATAAAGG AATTGGGTTT TCAAGCAGGG CTGGCGGTGA ACCCTGAAAC ACCTGTTTCA 
GATTTTGCTT ATCTGGTGCC GCAGCTGGAC ATGGTGCTTT TTATGTCGGT TATTCCCGGT 
TTTTACGGCG CGCCGTTTAT ACCTGAGGTG CTCCTGAAGG TAAAAGAGTT TAAACGCCGT 
TTTCCCGAAA CTGAAATAGG TCTGGACGGC GGTGCTAAAG AGGGCAACAT ACCTGAGATT 
GTGGCGGCCG GGGTAAATGA TATATGCGTG GGAAGTGCTA TCTTCCGGCA AACTGACCCT 
AAGTCAAGCT ACCTGTATTT GGATAAACTG GCTAAAAATG CCTCCAAAGA AGCGGGTATT 
TAG
 
Protein sequence
MKDVKIVPAV LTDDPAAFEC MLNQLESFAP SAQIDIMDGQ FVPSLSIPPE VLGRYKPRFA 
SEIHLMTLNP EEYLTYCKQH GAFRVIFHFE ATTRPEYVIS RIKELGFQAG LAVNPETPVS 
DFAYLVPQLD MVLFMSVIPG FYGAPFIPEV LLKVKEFKRR FPETEIGLDG GAKEGNIPEI 
VAAGVNDICV GSAIFRQTDP KSSYLYLDKL AKNASKEAGI