| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0619 |
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| Symbol | ccdA |
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| ID | 3230030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 571735 |
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| End bp | 572436 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637120184 |
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| Product | cytochrome c-type biogenesis protein CcdA |
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| Protein accession | YP_181361 |
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| Protein GI | 57234562 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0785] Cytochrome c biogenesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.492641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGAAGATA TCTCTTACCT TTTAGCCCTG GGGGGCGGTC TGGCCGCCTT TTTCTCTCCC
TGTGTGCTGC CTATGATGCC TGTATATCTG GCCAGTCTGA CCGGCAGAGA GATACTGGAT
ACCCGACCGG ACTTTGCCGT TTCTTTTAAA ACTCTGCCGC ATTCAGCCGC CTTTGTAGCC
GGTTTCAGCC TTGTTTTTAC CAGCCTGGGA GCATTAGCCG GACTGGGAGG CGTCATTATA
AACCCAAGCG AACTCTGGAT AAGAATACTT TCCGGGGGAA TACTTGTCAT CTTCGGCGGA
TATATGCTGC TTAGCCTCCG TTTCCCATCC CTCAGTTTTG AAAAACACCT GTTCGGCCAG
CAAAGCCTGC GTGGTGGCAG TTATGTCCGC TCTTTTTTAA GCGGGGCTAT TTTTACCCTT
GCCTGGACGC CCTGCATAAG CCCTATACTG GGAAGCATAC TTAGCCTTAC CTTCGGAGGG
GAAAGCCCGC TTTACGGTTC GGCTCTGCTG GCTGTTTTTT CACTGGGCAT GGGTATACCC
TTTCTTGTAT TAGGTTTGCT GCTTCAAAAA ACCCTGCCTC TTATCCGCAA ACACAGCCGC
TACTCAGGAG CTGTATACGG GATAAGTGGC GGGATACTGA TAGTTATTGG TATACTTATA
CTGAGCAATC AAATAGGGTT TTTTAGTACT CTGCAAATTT AA
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| Protein sequence | MEDISYLLAL GGGLAAFFSP CVLPMMPVYL ASLTGREILD TRPDFAVSFK TLPHSAAFVA
GFSLVFTSLG ALAGLGGVII NPSELWIRIL SGGILVIFGG YMLLSLRFPS LSFEKHLFGQ
QSLRGGSYVR SFLSGAIFTL AWTPCISPIL GSILSLTFGG ESPLYGSALL AVFSLGMGIP
FLVLGLLLQK TLPLIRKHSR YSGAVYGISG GILIVIGILI LSNQIGFFST LQI
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