| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0603 |
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| Symbol | rpoB |
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| ID | 3230060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 554608 |
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| End bp | 558426 |
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| Gene Length | 3819 bp |
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| Protein Length | 1272 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120168 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_181345 |
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| Protein GI | 57234592 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCTA TGTTACCTAA GGCCGACGCC GCCACCGGTA TAACCCGCAA ATCTTATGCC
CAACTACCCG AGGTTGTCAA TGTACCTAAC CTGATAGAGA TGCAGCTGCA GTCTTTTGTC
TGGTTTCAGG AGGAGGGTCT CCGTGAACTG ATTGAGGAGA TTTCCCCTAT CAAAGACTTC
GTGGGCAACA GACTGGAACT GGAATTCATT GGCTACGAAT TCCGCGAACC CCGTTTGTCT
GAGTACGAAT GCACTCAGCG TGACCAGACC TATTCTGTAC CTTTGTATGT TAAAGCCCGG
TTAATAGTTA AGACTACCGG TGAAATCAAA GAGCCCTTTG ATTTGTTCTT CGGTGACATC
CCCCTGATGA CCGCTTTGGG CACATTTATT ACCAGCGGTA CGGAGCGGGT GGTTGTCAGC
CAGCTGCTGC GTTCACCCGG CGTTTACTTC ACTATTTCAG ATGACCCGGC CACCGGCCGC
CCTCTCTGCC ATACTAACCT TATTCCCAGC AGAGGTGCCT GGCTGGAGTT TGAAACCTCC
AACCGGGATG TTATTTCAGT CAAGATTGAC GGCCGCCGCA AGATTCCCGT CAGCACCCTT
CTGCGGGCCA TAGGTTATTC TGATGACCTG GATATTTTAA ATCTGTTTGA GGTTATTGAT
AATGACCCCG AACGCCATTA TATCCAGTCC AGTATTGACC GCGACCCCCT TATAAAAGAC
GAAATCAGTG CTCTTATTGA TATTTACAGC CGCTTGCGCC CCGGTGACCC GCCCAATGCG
GACAACGCCC GCAAGCTTAT TAACGAAATG TTTTTTGACC CCCAGCACTA TGACCTGGGC
AAGGTAGGCC GTTACAAGGT TAACCGCCGT CTGGAGCTGC CTGACCGCGA GGTTGGTGAC
AACCGTGCCC TTACCCGCGA AGACATAGTG GCTATAATCA AGCGGATTAT CATGGTCAAC
AATGGCCAGG ATACCCCTGA TGACATTGAC CACCTGGGTA ACCGCAGAAT CCGGACGGTG
GGTGAACTGG TTCAAAACCA GTTCCGCATA GGTCTGGTAC GTCTGGAAAG GGTTGCCCGT
GAGAGAATGA GCATTGTAAA TCTGGAAGTA GTTACTCCCA GCGCTCTGGT TAATATCCGC
CCGGTGGTTT CGGCAGTTAA AGAGTTCTTC GGTGGTTCAC AGCTTTCCCA GTTTATGGAC
CAGACTAACC CTCTGGCTGA AATTACCAAT AAACGCCGTC TGTCCGCCAT GGGCCCCGGC
GGTCTTTCCC GCGAAAGAGC CGGCTTTGAC GTTCGTGACG TTCATTATTC CCATTACGGG
CGTATCTGCC CTATTGAGAC ACCTGAAGGC CCGAACATTG GTCTTATCGG TTCTCTGGCT
ACCTATAGCC GGATTAACCG CTACGGTTTT GTGGAAACCC CTTACCGCAA GGTTTATTCC
AAACTGAAAA ATAATGATAA AAAACTGGTA GGCCTTAAGC TTGCAGCCGC AGTCAGTGAC
AAAGACAAAG TGCTGGCATC AGCCGGAAGC GTAGTCAGCG AAGAAAATTT CAAGCTTATT
TCAAAGCTGC CGGAGTGTGA TATTCAGGTT ATGCCTTTTG TATCTGCCGA GGTCAAATAT
ATGCCGGCAG ACGAAGAAGA CCGCTATATT ATCGCTCAGG CCAATACCCG TCTGGACGAG
AACGGTTATT TCCTGGATGA AAGGATTGAA GCCCGTCTGG CTGAACGCTA TGTAATAGAA
CCCCCCGAAA AGATTGATTA CATGGATGTT TCACCCAAAC AGATTTTCAG CGTGGCGGCT
TCGCTCATAC CCTTCCTTGA GCATGATGAT GCCAACCGTG CCCTTATGGG TGCCAACATG
CAACGCCAGG CTGTGCCTTT GCTTCGGGCA GAAGCTCCCA TGGTGGCAAC CGGTATGGAA
CGCGAAGCAG CCAGATACTC CGGTCAGGTT ATTTTTGCCA AGCGCGCCGG TGTAGCTGCT
TCGGTGACCA GCGAAAAGAT AATAATCCGC ACCGCCGAAG GTCAGGATGA CGAATATCTG
CTGAAGAAAT TTGTCCGCAC TAACCAGGGT ACTTGTATAA ACCAGCATGC CGTTATAAAT
AAAGGACAGA AGATAGAAGC CGGGCAGGTA CTGGCTGACA GCTCTGCTAC CGAAAATGGC
GAACTGGCTC TGGGTCAGAA CTGCGTAGTA GCCTTTATGA GCTGGCAGGG TTTCAACTAT
GAAGATGCCA TTATCCTCAG CGAACGGCTG GTAAGGGAAG ACGCCTTTAC CTCTATCCAT
ATTACCAAGC ATGAACTTGA GGCCCATGAT ACCAAGCTGG GCGGTGAGGA AATAACCCGT
GATATCCCCA ACGTGGGTGA AGAAAGCCTG CGTGAGCTGG ACGAAGACGG TATTATCCGC
ATCGGGGCTG AAGTAGGCCC GGATGATATT CTGGTGGGTA AAATCACCCC CAAGGGTGAA
ACCGAGCTTT CAGCTGAGGA AAAACTCCTC CGGGCTATCT TCGGTGAAAA AGCCCGCGAA
GTTAAAGATA CTTCACTCCG TATGCCTCAC GGTGAATGGG GCAAGGTTAT AAACGTAAGG
GTCTTCTCCC GTGAAAACGG TGATGACCTG CCTGCCAGGG TTAACAAATG GGTGCAGGTC
TGGGTTGCCC AGAAACGCAA GGTTTCAGTG GGTGACAAAC TGGCCGGCCG CCATGGTAAC
AAGGGTGTTA TCTCCATAAT TGCCCCGGTA GAGGATATGC CTTACCTGCC TGACGGCACT
CCGGTAGATG TGGTATTGAA CCCCATCGGC GTACCTTCCC GCATGAACCT GGGGCAGATT
CTGGAAACCC ATCTGGGCTG GGCAGGACAC CTGCTGGGCT TCAGGGTGGC CACCCCCGTA
TTTGACGGGG CAGATGATAC CGCCATTGAA GACGCCTTGG CCCGTTCCTG GCTTTCCGCC
AAGGCCGGTG CTACAGACAT GAGCCCGGAA AACAAACGCC CCAGCACTGA TACCGCCAAG
GCTGTAGAGT GGATTAAACA ACAGGGGTTT GACGGTAAGA AGGTCTTTGA CGAAAGGCAC
CCCGGTCTGG CCAAGGAAGT CAGCCTGAAG CTTTGGCTGA AGGATATGGG GGTGGATGCT
TCTTCTTTAA GCGGGGCTGA ACTGGAAAAG AAAGCCTACG AAGTAAGCAG TCAAAGCCGT
CTGCCTTCGC CTATTGTGGG TAAATCAGTT TTGCGGGACG GGCGCACCGG CGAAACCTTT
GACCAGCCGG TAACCGTAGG CAATATGTAT ATTTTGAAAC TTATCCATCT GGTGGAGGAT
AAAGTCCACG CCCGGGCCAC CGGTCCTTAT TCGCTCATCA GCCAGCAGCC TTTGGGCGGT
AAAGCCCAGT TCGGCGGCCA GCGCTTCGGT GAGATGGAAG TTTGGGCTAT GTACGCTTAT
GGTACAGCCC ATAACCTGCA GGAAATGCTG ACTATCAAGT CAGACGATAT TGCCGGGCGC
GCCAAGGCTT ATGAATCCAT TGTAAAGGGT GAGGATGTAA TCCAGCCCGG TGTCCCTGAA
TCCTTTAAGG TACTGGTAAA AGAGCTTCAG AGCCTGGGTT TGGCTGTTGA AGTAATAAAT
GAAGAAGTCA AGATTGCCCC CTCCGAAAAG GTGGCCGCAC TGACTGAGGC CAACCTGCCG
GGCAGTGAAG ATGTTTCTGC TGAAATACTG CCTGAGACCC TGTATGCAGG CGCCGAGGAT
ATTGAAGACT CCATGATGTC GGTAATTGAT ACTGACGACC AGGATTTGGC AATGTCATCA
AATGATGAAG AGGTATCCGA AAACGATGAA CGAAGTTAA
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| Protein sequence | MVSMLPKADA ATGITRKSYA QLPEVVNVPN LIEMQLQSFV WFQEEGLREL IEEISPIKDF
VGNRLELEFI GYEFREPRLS EYECTQRDQT YSVPLYVKAR LIVKTTGEIK EPFDLFFGDI
PLMTALGTFI TSGTERVVVS QLLRSPGVYF TISDDPATGR PLCHTNLIPS RGAWLEFETS
NRDVISVKID GRRKIPVSTL LRAIGYSDDL DILNLFEVID NDPERHYIQS SIDRDPLIKD
EISALIDIYS RLRPGDPPNA DNARKLINEM FFDPQHYDLG KVGRYKVNRR LELPDREVGD
NRALTREDIV AIIKRIIMVN NGQDTPDDID HLGNRRIRTV GELVQNQFRI GLVRLERVAR
ERMSIVNLEV VTPSALVNIR PVVSAVKEFF GGSQLSQFMD QTNPLAEITN KRRLSAMGPG
GLSRERAGFD VRDVHYSHYG RICPIETPEG PNIGLIGSLA TYSRINRYGF VETPYRKVYS
KLKNNDKKLV GLKLAAAVSD KDKVLASAGS VVSEENFKLI SKLPECDIQV MPFVSAEVKY
MPADEEDRYI IAQANTRLDE NGYFLDERIE ARLAERYVIE PPEKIDYMDV SPKQIFSVAA
SLIPFLEHDD ANRALMGANM QRQAVPLLRA EAPMVATGME REAARYSGQV IFAKRAGVAA
SVTSEKIIIR TAEGQDDEYL LKKFVRTNQG TCINQHAVIN KGQKIEAGQV LADSSATENG
ELALGQNCVV AFMSWQGFNY EDAIILSERL VREDAFTSIH ITKHELEAHD TKLGGEEITR
DIPNVGEESL RELDEDGIIR IGAEVGPDDI LVGKITPKGE TELSAEEKLL RAIFGEKARE
VKDTSLRMPH GEWGKVINVR VFSRENGDDL PARVNKWVQV WVAQKRKVSV GDKLAGRHGN
KGVISIIAPV EDMPYLPDGT PVDVVLNPIG VPSRMNLGQI LETHLGWAGH LLGFRVATPV
FDGADDTAIE DALARSWLSA KAGATDMSPE NKRPSTDTAK AVEWIKQQGF DGKKVFDERH
PGLAKEVSLK LWLKDMGVDA SSLSGAELEK KAYEVSSQSR LPSPIVGKSV LRDGRTGETF
DQPVTVGNMY ILKLIHLVED KVHARATGPY SLISQQPLGG KAQFGGQRFG EMEVWAMYAY
GTAHNLQEML TIKSDDIAGR AKAYESIVKG EDVIQPGVPE SFKVLVKELQ SLGLAVEVIN
EEVKIAPSEK VAALTEANLP GSEDVSAEIL PETLYAGAED IEDSMMSVID TDDQDLAMSS
NDEEVSENDE RS
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