Gene DET0561 details

Gene Information

• Locus tag: DET0561
• Symbol: atpH
• ID: 3230097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 515689
• End bp: 516231
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637120126
• Product: F0F1 ATP synthase subunit delta
• Protein accession: YP_181304
• Protein GI: 57234629
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.132233
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCAAAA GAGTTTATGC TATAGCCATG CGTTATGCGC AGGCATTATA CGAACTGGCT 
AAGGAGCAAA AGTCTCTGGA TAAGTGGCAG GAAGATTTAC AGGATCTTTC CAGCCTCACA 
GAGGATGCTT CGGTTGCAGA GTTTCTCAGC AACCCCAAAA TTGCCTCTGC CAGAAAACAC 
AAGGTCCTTG CCAAGCTGAG CAATATAGAT CCGCTGATGC TGAACCTGGT GGATATGCTG 
GTGGCTACCC GCAGGCTGGG TATCATGAGG GCTGTTTCAG GTGAGTATAA CCGTTTGCTG 
AATGAGGCCA GAGGGGTGGA GGATGCTATT GTAACCACTG CCAAGCCTTC CAGCGAAGCG 
GATATTGAAA TAATCAGACA GCAGTTAAGC AAGATAACCG GGAAAAAGAT AAATGTAGTA 
ACTGCAACAG ACCCCGGCTT GATAGCTGGT CTGAAAGCCA GAATCGGGGA TAAACTGATA 
GATGGTTCTG TCAGCCGGAG GCTGGTCTTA CTGCAAAACG AAATCAGTCA GGGACGTATT 
TGA 

 

Protein sequence

MAKRVYAIAM RYAQALYELA KEQKSLDKWQ EDLQDLSSLT EDASVAEFLS NPKIASARKH 
KVLAKLSNID PLMLNLVDML VATRRLGIMR AVSGEYNRLL NEARGVEDAI VTTAKPSSEA 
DIEIIRQQLS KITGKKINVV TATDPGLIAG LKARIGDKLI DGSVSRRLVL LQNEISQGRI