Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0539 |
Symbol | |
ID | 3230143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 492705 |
End bp | 493415 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637120105 |
Product | DnaD and phage-associated domain-containing protein |
Protein accession | YP_181283 |
Protein GI | 57234674 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3935] Putative primosome component and related proteins |
TIGRFAM ID | [TIGR01446] DnaD and phage-associated domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.245634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATG CGCCATTATT CCCCGCCAGA CAGGAGTTTA CCCCCGTATC CCGCTTTTTT ATCCACCGGG TAGCTCCCCT AATAGAAGAT ATGACCGAAC TGAAGGTAAG CCTGGCGGTA TTCAGCCTTA TTCAGGCAAA AAAAGGATAC CCCAGATACA CCACGCTGGC TGAACTGGCA GCCGAAGAAA CCCTGGTAAA AGCCTTGGGC AAAACGCGGG ACGAAAGCCT GCAATCACTG GATAAAGCCC TCCAAATGGC CGTAAAACGG GGAACCCTGC TGGGGCTGGA AATAAAAAGC GGCAAACACA CCCACCAGCT TTATTTTGTA AATACCGAAT CAGAAGCGGC AGTGGTGGAA AAGATAAAAA CCGGCAATCT GGTTTTGCCC GGCTTAAAAG AAGCCTCAAC CGAAGTAATA AGCGGCCAAG CCGAACAGCC AAATATATTT AAACTTTACG AACAGAATAT AGGCATGCTG ACCCCCATGC TGGCAGACAA CCTGAAAGAG GCGGAAAAAC TCTACCCCGA AGAATGGATT GCCGAAGCCA TAAAAGAGGC GGTCAACCTG AATAAACGCA ACTGGCGTTA TATAGAACGA ATACTGGAAA ATTGGTCAAG TCAGGGAAAA AACAGTGGAA CACATAAAGG ACATACTGGG GAAACAGATA AATATAAAGG GCAGCTCTTC GACCACCTCG TCCAAAGGTA A
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Protein sequence | MSNAPLFPAR QEFTPVSRFF IHRVAPLIED MTELKVSLAV FSLIQAKKGY PRYTTLAELA AEETLVKALG KTRDESLQSL DKALQMAVKR GTLLGLEIKS GKHTHQLYFV NTESEAAVVE KIKTGNLVLP GLKEASTEVI SGQAEQPNIF KLYEQNIGML TPMLADNLKE AEKLYPEEWI AEAIKEAVNL NKRNWRYIER ILENWSSQGK NSGTHKGHTG ETDKYKGQLF DHLVQR
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