| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0530 |
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| Symbol | |
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| ID | 3230161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 483324 |
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| End bp | 484505 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637120096 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_181274 |
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| Protein GI | 57234692 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.911327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGG CAGTTATACT GGCGGCCGGT GAAGGACAGC GTCTTAGGCC TTTTACCTCA
AGCAAGTCAA AGGTTATGTT GTCTATTGCG GGTAAGCCAC TGCTTGAGTA CGTTATTGAA
TCCCTTGCCC GAAACGGTAT CCGGGATATT ATTCTGGTAG TGGGTTATAA ACGTGAGCGT
ATCTTTGATT ATTTCGGAGA TGGCGGGCAT CTGGGGGTAG AGATAACCTA TGTCAGTCAG
CCAAACCAGC TGGGTACAGC CCATGCCCTT AAGCAAACCA GAGACAAAAT CAGAGGGGAT
TTTCTGGTAT TAAACGGAGA CCAGCTTATT AGTCCGGCAA CCATAGGTGA TTTTGTAAAA
GAGCCGCCCC AGGCTGTTAT GGTAAAAGCT ATAAACGGTG AAGACCCCAG GCGGTACGGG
GTGGTAAGCT CTTCGGGCAG GCGTTTGACC TCTATAGAGG AAAAACCCAG TATAGCTAAG
AGCAATTTGA TAAATACCGG CATTTACTCC TTTTCAACCC GGGTGTTTGA CTATATTGCT
GAGCATCTGG ATATCCCGAT GGTCTTGCAG TCCATGATTA AAGACGGGCT GGATATACGG
GTAGCAGAAA GCCGGGGTGT CTGGCTGGAT ATAGTCTACC CGTGGGATAT GCTCTCACTT
AATGCAGTTG TCTCAGATAC ACTCAAGCCG GGCGTAGCCG GTACTATTGA AAGCGGCGTG
GTGATGAAAG GGCCGGTGCT TATCGGCAAA AATACGGTTA TCCGCTCCAA TTCATATATT
ACAGGCCCGG TGATAATCGG TGAGGGTTGT GATATCGGGC CGAGTGTCTG TATTTACCCG
TCCACCAGTA TTGCAGACAA TGTCACTGTC GCCCCTTTCT GCCAGATAAA AAACAGCCTT
ATTTACAGCG GTAACAGTAT CGGGGTGGCT TCGGTTATTG AAGATTCGGT TATAGACCGG
GGCTGTGTGA TTCGCGGCCA GTTCAGCGCC CCTTCCGCCG AGGTGGAAAC CCGCATAAAT
GATGAATTAC ATAAAATAAA AGTAGGTACT ATGATGGGTG AAGACTGTAT GGTGGGGAAC
GGTGCAGTTC TTCAGGGCGG TACGGTGGTG GGAAATTCCA GCCGTATAGC CCCTTTAAAA
ACCCTGTCGG GCAGTATACC TGACGGCAGT CTGGTGGTCT AG
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| Protein sequence | MKQAVILAAG EGQRLRPFTS SKSKVMLSIA GKPLLEYVIE SLARNGIRDI ILVVGYKRER
IFDYFGDGGH LGVEITYVSQ PNQLGTAHAL KQTRDKIRGD FLVLNGDQLI SPATIGDFVK
EPPQAVMVKA INGEDPRRYG VVSSSGRRLT SIEEKPSIAK SNLINTGIYS FSTRVFDYIA
EHLDIPMVLQ SMIKDGLDIR VAESRGVWLD IVYPWDMLSL NAVVSDTLKP GVAGTIESGV
VMKGPVLIGK NTVIRSNSYI TGPVIIGEGC DIGPSVCIYP STSIADNVTV APFCQIKNSL
IYSGNSIGVA SVIEDSVIDR GCVIRGQFSA PSAEVETRIN DELHKIKVGT MMGEDCMVGN
GAVLQGGTVV GNSSRIAPLK TLSGSIPDGS LVV
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